Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00582 ATGGCTGGACCATCATGGTTGGTGGACCCAAAAAGAATTGCTACCAAAATCAAGAGTGCTTCTGGAACATCTGAACATAGCAAAGTCCTATGGAAAAGCAATCCAACTAGAGCTTGTCCTAATTGCGAGTATATAATTGACAACAGTGATGTTGCCCATGAGTGGCCTGGTTTACCAAGAGGTGTGAAATTTGATCCTTCTGACCAAGAGATAATAGAGCACTTGCTCGGTAAGGTCGGTATTGAAAATTCAAAGTCCCATCCTTTCATTAATGAGTTCATCCTTACTCTTGAAGGTGATGATGGAATATGTTACACCCATCCTCAAAATTTACCAGGTGTTAAGCAAGATGGGAGTGTTTCCCACTTCTTTCATAGAGCGATCAAGGCTTACAATACCGGAACTCGAAAGCGTAGAAAAATACATGGTGAAGATTTTGGGGATGTCCGTTGGCATAAGACGGGAAGAACTAAACCTGTAATATTGGATGGAGTTCATAAAGGCTGTAAAAAGATTATGGTGCTCTACATGACCCTTGTTAGAGGAGGGAAACCAGAGAAAACCAATTGGGTAATGCACCAGTATCACCTAGGAACTGAGGAGGATGAGAAGGATGGAGAGTATGTGATTTCAAAAGTGTTTTACCAACAGCTACCAATCATCAAAGGAGGTGATAAAAATGATAGTGGGAGTCCTGAAGTTGCTGAGGCATCCATAGTGAAAGTTGATCCAGTTACCCCTAAATCGGTAACTCCTGACCCTCCTCGTTCTGAAAGGCAGTCTTCAGATTTTGAACTTGTAGAGGAGCCAAATATTTCCACTGTTCCCACATATCAGCATCCTGTTATGGACTACGTTGAAGATGATATACAAGCTGATATTGAGCGACAAAATGTTGAAATTCATCCCAATGAATTGTTGGACGATAATGACAATCAAGCTCAGGAAGAGCCAAAGTGGTGGGATAGTGAATCGCAACATTTGTTAGACTCACAACAGCTTGTCGAGGCATTGTCTTTGTGTGAAGATCTTCTTCAAAGCCAATCTCCTAATAGGGATGAAAATGGGAATGATAGAGCCTCTGATGCCAAACCCCGTCTTTCTGACTATGCACAGCTAGGGCCAGAGCACCTGAAAAAGGATATTGAGGAGTGCCAGAAGATCGAACTCGACCCTGCAAACATTGAACTTGATACGCCGCCAGAGTTCCGACTTAGCCAACTGGAATTCGGGTCCCAGGATAGCTTTCTAGCTTGGGGCAGTAGCAGGTTAGGTGACTGA 1281 0.4309 MAGPSWLVDPKRIATKIKSASGTSEHSKVLWKSNPTRACPNCEYIIDNSDVAHEWPGLPRGVKFDPSDQEIIEHLLGKVGIENSKSHPFINEFILTLEGDDGICYTHPQNLPGVKQDGSVSHFFHRAIKAYNTGTRKRRKIHGEDFGDVRWHKTGRTKPVILDGVHKGCKKIMVLYMTLVRGGKPEKTNWVMHQYHLGTEEDEKDGEYVISKVFYQQLPIIKGGDKNDSGSPEVAEASIVKVDPVTPKSVTPDPPRSERQSSDFELVEEPNISTVPTYQHPVMDYVEDDIQADIERQNVEIHPNELLDDNDNQAQEEPKWWDSESQHLLDSQQLVEALSLCEDLLQSQSPNRDENGNDRASDAKPRLSDYAQLGPEHLKKDIEECQKIELDPANIELDTPPEFRLSQLEFGSQDSFLAWGSSRLGD* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00582 426 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 5 386 IPR044799 GO:0003700
Pte10g00582 426 FunFam NAC domain-containing protein 8 67 219 - -
Pte10g00582 426 SUPERFAMILY NAC domain 43 216 IPR036093 GO:0003677|GO:0006355
Pte10g00582 426 Gene3D NAC domain 67 218 IPR036093 GO:0003677|GO:0006355
Pte10g00582 426 MobiDBLite consensus disorder prediction 244 264 - -
Pte10g00582 426 Pfam No apical meristem (NAM) protein 59 197 IPR003441 GO:0003677|GO:0006355
Pte10g00582 426 MobiDBLite consensus disorder prediction 347 369 - -
Pte10g00582 426 ProSiteProfiles NAC domain profile. 58 216 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00582 Pte-Chr10 5325778 5330983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00582 5 244 NAC Transcription Factor Family AT4G28500 50.407 4.67e-76 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte10g00582 NAM 1.3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00582 - - jre:108993283 648.277