Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00575 ATGCTGGATTCCTATCAAAAGATGCAACAAAGGATGAACTTTAATGAATACATTGAAGCGTTAGAACGAGAGCGCTCCAAAGTTGAAGTGTTTAAACGCGAGCTTCCTCTTTGTCTTGAGCTTCTCACACAAGCCATTGAAGCATGTAAGCAACAGTTGTCAGGGACAACCACCGAGTACAATTTGCATGGACAATCTGAGTGTTCGGAGCAGACGTCAACTGAAGTTCCTGTTCTGGAAGAGTTTATCCCAATGAAGAAAAGGGCTTCTTCTGATTTTCGTGATGTTGAGGATGCCGACGATGAAGATGATGAACAACATTCTCACAAGTCTAAAATCAGCAAAGAAACGTATCACATTGATAAGAAGTCGGATTGGCTGAGTTCTGTTCAATTGTGGAATCCAGATCCACCCGTTGAAGAGGATGCGACGAGGAAGGAAACGGTGACTAAAGTAAAGAAAAACGGTGGGGCTTTCCAGCCTTTCCAGAGAGAGAAAACTGTTGGCAAGACAAATGCATCAACTAGTAAAGCTTCAACCTCTTCGGTTCCGATGCCATCGACAAGCTCTACGGCTGAAAGAGTCGGAGAAGGAGATCATATTGGAAGCAGCAGAAAGGAAGACAAAGAAGGACAGAGGAAGCAGCGGAGGAGTTGGTCCCCTGAGTTGCACAAACGGTTCTTGGATGCCGTTCAGCAACTTGGTGGTTCAGATGTTGCAACACCTAAGCAAATTAGGGAGTTGATGAAGGTTGATAGGCTCACAAACGATGAAGTCAAAAGCCATTTGCAGAAATTTCGTTTACATACAAGAAGACCGAGCCCCACAGTCCACAACAATGCCAATCCTCAGACATCCCAGTTTATACTCGTGGGAGGCATATGGGTACAGCCACCCGAATTTGCTGCAATGGCAACAAAAGCAACTTCTGGGGATGCGCCTAATGGTATCTATGCCCCATTGGCTACGCAGCCACATACAGTTCCACATCTTCATGCTTCTCTAGCTCTGAAGCCAAAACCTAAGCAAGCTGAGCAGTCTGAGCAGTTCTCTCAGTCAGAAGAAAGGGCAAGTCACAGTGAAGGGGATGTCCATTCCAATTCTCCCGCTTCTTCATCGTCCACGCTCTGA 1131 0.4598 MLDSYQKMQQRMNFNEYIEALERERSKVEVFKRELPLCLELLTQAIEACKQQLSGTTTEYNLHGQSECSEQTSTEVPVLEEFIPMKKRASSDFRDVEDADDEDDEQHSHKSKISKETYHIDKKSDWLSSVQLWNPDPPVEEDATRKETVTKVKKNGGAFQPFQREKTVGKTNASTSKASTSSVPMPSTSSTAERVGEGDHIGSSRKEDKEGQRKQRRSWSPELHKRFLDAVQQLGGSDVATPKQIRELMKVDRLTNDEVKSHLQKFRLHTRRPSPTVHNNANPQTSQFILVGGIWVQPPEFAAMATKATSGDAPNGIYAPLATQPHTVPHLHASLALKPKPKQAEQSEQFSQSEERASHSEGDVHSNSPASSSSTL* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00575 376 MobiDBLite consensus disorder prediction 154 221 - -
Pte10g00575 376 FunFam Myb family transcription factor 213 271 - -
Pte10g00575 376 NCBIfam myb-like DNA-binding domain, SHAQKYF class 214 269 IPR006447 GO:0003677
Pte10g00575 376 SUPERFAMILY Homeodomain-like 212 272 IPR009057 -
Pte10g00575 376 MobiDBLite consensus disorder prediction 165 194 - -
Pte10g00575 376 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 353 IPR044787 GO:0003700|GO:0006355
Pte10g00575 376 Pfam Myb-like DNA-binding domain 216 265 IPR001005 -
Pte10g00575 376 MobiDBLite consensus disorder prediction 330 376 - -
Pte10g00575 376 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 211 271 IPR017930 -
Pte10g00575 376 Gene3D - 213 271 - -
Pte10g00575 376 MobiDBLite consensus disorder prediction 89 116 - -
Pte10g00575 376 MobiDBLite consensus disorder prediction 198 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00575 Pte-Chr10 5222431 5224738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00575 2 323 G2-like Transcription Factor Family AT1G68670 49.412 1.54e-86 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte10g00575 Myb_DNA-binding 4.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00575 - - qsa:O6P43_032783 447.973