Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00565 ATGGCTTCAGTAGGAAGAGGATGTGTGGATACAGAGCAGCCCTTCATTTTTTCGAAAGGGACCACGATACCTGCATCATTGGCGAACGGGCACATTGAGAATTGGGGTGATTCAGGAATGGCAGACCATAGCCAGCAGACTGATACTTCAACAGATGTTGACAACGATGATAAACATCAATTCAATGGGATGCACCATGGGGCTTTTGTTGCTGTAGATTCCACGGACCAATCAAGAGAAAAATCTTGTGATCAGAAAACGCTACGTAGGCTGGCTCAGAATAGAGAAGCTGCACGGAAGAGTAGGCTAAGGAAAAAGGCATATGTTCAACAACTTGAAAACAGTCGACTCAGGCTGGCACAATTGGAGCAAGAGCTGCAACGGGCCCGTCAGCAGGGTATATTCATCTCCACGGGAATTACTGGTGATCATTGCCACTCAATTGCTGCAAATGGTGCTCTGGCATTTGACATGGATTATGCGCGCTGGCTGGATGAGCATCAACGTCTCATTAATGATCTTCGATCAGCTGTCAATTCTCAAATGAGTGACAACGACTTGCGTCTTCTTGTTGATGAAGTGATGGCACATTATGATGAAATATTCAGGCTCAAGAGTGCAGGTACTAAAGCTGATGTGTTTCACATGCTTTCTGGAATGTGGAAGACTCCTGCAGAAAGGTGTTTCATGTGGCTCGGTGGTTTTCGTTCGTCCGAACTCCTTAAGATACTTGGTAGCCAGCTTGAACCATTAACAGAACAGCAATTGATGGGGGTTTGTAATCTTCAGCAATCCTCCCAGCAGGCTGAGGATTCTTTGTCACAAGGAATGGAAGCCTTGCAGATATCTTTGTTAGAGACTCTTTCATCAAACTCCCTGTGCTCTTCTGGTTCTGGAAATGTTGCTGATTACATGGGCCAAATGGCACTTGCAATGAGCAAACTTTCCACATTAGAGAATTTCGTCCATCAGGCTGACCTTTTGAGGCAACAGACAATGCGGCAGATGCATCGAATCTTGACGACACGTCAAGCAGCTCGCGCCCTACTCGTTGTAAATGACTATATCTCACGTCTTAGAGCACTTAGTTCTTTATGGTTGGCACGGCCTAAGGAATGA 1119 0.4576 MASVGRGCVDTEQPFIFSKGTTIPASLANGHIENWGDSGMADHSQQTDTSTDVDNDDKHQFNGMHHGAFVAVDSTDQSREKSCDQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQGIFISTGITGDHCHSIAANGALAFDMDYARWLDEHQRLINDLRSAVNSQMSDNDLRLLVDEVMAHYDEIFRLKSAGTKADVFHMLSGMWKTPAERCFMWLGGFRSSELLKILGSQLEPLTEQQLMGVCNLQQSSQQAEDSLSQGMEALQISLLETLSSNSLCSSGSGNVADYMGQMALAMSKLSTLENFVHQADLLRQQTMRQMHRILTTRQAARALLVVNDYISRLRALSSLWLARPKE* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00565 372 SMART brlzneu 82 135 IPR004827 GO:0003700|GO:0006355
Pte10g00565 372 MobiDBLite consensus disorder prediction 34 56 - -
Pte10g00565 372 FunFam BZIP family transcription factor 85 134 - -
Pte10g00565 372 CDD bZIP_HBP1b-like 86 138 - -
Pte10g00565 372 PANTHER TRANSCRIPTION FACTOR TGA9 33 371 - -
Pte10g00565 372 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 84 128 IPR004827 GO:0003700|GO:0006355
Pte10g00565 372 Pfam bZIP transcription factor 86 124 IPR004827 GO:0003700|GO:0006355
Pte10g00565 372 ProSiteProfiles DOG1 domain profile. 153 369 IPR025422 GO:0006351|GO:0043565
Pte10g00565 372 Pfam Seed dormancy control 171 244 IPR025422 GO:0006351|GO:0043565
Pte10g00565 372 Coils Coil 105 132 - -
Pte10g00565 372 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 89 104 IPR004827 GO:0003700|GO:0006355
Pte10g00565 372 SUPERFAMILY Leucine zipper domain 86 128 IPR046347 GO:0003700|GO:0006355
Pte10g00565 372 Gene3D - 85 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00565 Pte-Chr10 5115309 5117763 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00565 8 373 bZIP Transcription Factor Family AT1G68640 70.652 2.59e-173 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte10g00565 DOG1 8.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00565 K14431 - qsa:O6P43_032773 573.163