Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00561 ATGGCTACTGATCGTAAACCTCGTCGAACGTCTTCTCCCGACGAGACGGAGAGGTCGTCAAAGCGTCACAAACACCGCCACCACCACCACAGCCGCCACCATAGGCATCGTCATGGTAGTAAGAAGCATGAAGAAACCAAACATGAAAATGAGATTGATGCTGTTAGTGCTGAAGAAATTCCTCCATCTGGTGCTCGTAATTCTGAAACTGTCAGTCACCGACATGATGACGATGTTGAAGAAGGAGAGATTCTCGAGGAAGATGGTTTGTCCGGTGAAATTGAGAATAAGGTAGGCGATTCTGGTTCTATTTCTGATTCTGATTCTGGTGAATTGAAGATGGCTGGATCCAAAGATGTTCAATCTGACAAACTTGATATGAAACATCTTGTTGAAGAAATTCCTTCTGTTCATTTGAATGAGAGCGTTCGAACTAGTGCTAGTAATTCGTTGACAAAAGAATACGATGTGAGCAATGTGCCATTTACAACCAATGTAGGCTCTGATGGCAAAGAAAAGGGTTTATGCAAAGATTCTATGGATGAACTAGTTGTTAATTTTGGCAAATATACAATGGCCCATGGCCATGGGAATCATATATCTTGTCATCAGCCTGTATCTCCCAATGATGGTGGTCGGCACCAAAAACAATGTGATGATGATGAACTAGATATTGATCGAAGCAAATCAATTCTTCAAAGGTATAATTCATCGTCTGAAAGCACTGGGGATAAACACAATACCTCAAGATCACACCACAAATACCACGATGAATATGTATGTAGGAGTCCAACTAGATCAAGAAGTCATGCTAGAGAAAGATCACTTTCACATAGCACTGTAGAGGAAGATTCTCGTGGTAGAAAAAGGCTCTCTGATGAAGGGGTGAATGATGTATATGCTGAAAAACGAAAGACCAAGTATGGAGTGGATGATGGAAGTAGAGAGTCACGACATCAAAGCAGGGATATAGAAGAGCGCAGTGCTAGTTTTAGCTGTAGATATAATGGCATGGAGGATAGACATAGAAGTAAGGAAAGAAGTGACAGAGAGAGAAGTACTGATGGAGATAGAGACTTAAGGAGGCGAAGGAAAAGGGAAAGAAGTATGGAGATGGACGTTGACAGGGTTTGTAGGAGGGAGAAAGAAAGAGTAAGGAGTAAGGATAGGGATGTGGGCCATGGCCATCACAGGGAGAGGGACCAAGAAAGGAGGCTGGAAAAGGAAAGGACAATTGATGAAGAACGAGGCAGGAGCAGGGAAAGGGATGGGGATATGGACTGGAGAGCAGAGAACAGGAGAAGTAGGAGCAGGGACACCGAGAGGGAAAGGAGAAGGGACAAGGAGAGGTATAGCAGAAGGGACAAGGAGAGGGATAGGAGCAGCGATGCTCGGTTAGACAGGGATAGGAGAATGGAAAAGGATAGAAATAGGATCAGAGAGAGAGAGAGAGATACCTGGAGAGATGGAGATAGGGTGAGGGAAAGGGACCAACAGGACTGGTACAGAGAGATAGCTAAGGACAGGGAGATGCTTAGTAACAAAAACTCTCGGAATTCAAAGCTTGATGACACCAAGTACCTCTGGGACAGGAGAAGGCATCCTGAGGCAGAAAAGGCTCGTAATTTCTCAAGCAATTCAGTGGAAGAGAGTGAGAAACAAAAGAGAGAGGAGGTTGAACATGAAGACTTTGATGAAAATGTTGCGTTGAAGTTTTCTGATCAAGAAGAGGATGATCTGAACAAAATCAAGGAGGAAAGTAGAAGGCGGAGGGAGGCAATTTTAGAAAAATATAAGATGCAGAAATTGCAGCAACCAATGAACGTTGAGTCCCAAGATTTAGAAAAAGATAAAGGCCCTGTTAAAGGTGGTGATGGAAGTCCTGACAATTTGGATGATAGGGTAGATGATGTGGATGTGTGTGTTGAGGAGGCATCGTTTTCTGTTGGAAAGTCACCTCCTCATAATGGAAATGTTGTTCCTGGGAGATCTTCTGGTGCCGGGGGACTGGGAGAGGGTACCCCGAAGAGTGAGCGCTCAGATGATAAATTCTGTGATGATATTTTTGGCGACACTCCAACTGGAGTTCGAAAAACGGGTACGGAAGAGGGAATGAGAATTGAGAGGAGTGGCCTTAATGACAATTGGGATGATGCTGAGGGGTATTATGGGTACAGATTTGGCGAAATACTTGATGGTCGGTATGAAGTAACTGCAGCCCATGGGAAAGGGGTTTTCTCAACTGTTGTTCGTGCCAGGAATCTTAGGCCTGGAAATGGTGAACCAGACGAGGTTGCTATAAAAATTATACGTAATAATGACACCATGTACAAGGCTGGAATGGACGAGTTGGTAATATTGAAGAAATTAGTAGGTGCTGATCCAGATAACAAGCGACACTGTGTTCGTTTCCTTTCAAGTTTTAAGTACCGGAATCATCTTTGTTTAGTTTTCGAATCTCTTCAAATGAATTTGCGTGAGGTTTTAAAAAAATTTGGCCGCAATATTGGCCTTAGGCTTACTGCTGTGAGAGCATATGCAAAGCAACTATTTATTGCGCTGAAGCATCTTAGGAACTGTGGTGTTCTTCATTGCGATATAAAGCCGGACAATATGTTGGTAAATGAGGCAAAAAATGTCTTGAAGCTTTGTGATTTTGGTAATGCCATGTTTGCTGGTAAGAATGAAGTCACGCCATATCTTGTGAGCCGCTTTTATCGTGCTCCTGAAATAATTTTAGGCTTACAGTATGATCATCCATTGGATATGTGGTCTGTCGGTTGTTGTCTGTATGAGCTTTACACCGGGAAAGTTCTTTTTCCGGGTCCAACTAACAATGACATGCTTAGGCTTCAGATGGAGTTAAAGGGAACTTTCCCAAAGAAGATGCTTCGTAAGGGCGCATTCACTCAAGAGCATTTCGATCAGGACTTGAATTTTCATGCAACAGAAGAAGATCCAGTAACAAAAAAGACTATTAAGCGAATGATTCTGAACATCAAGCCAAAGGATATTGGATCAATCATTTCTGGCTCTCCTGGCGAGGACCCCAAGATGTTGCTCAATTTCAAAGATCTGCTAGATAAAATGTTTACACTAGATCCAGATAAGAGGTTGACAGTCTCTCAGGCATTGAACCACCCATTCATCACTGGCAAGTGA 3162 0.4307 MATDRKPRRTSSPDETERSSKRHKHRHHHHSRHHRHRHGSKKHEETKHENEIDAVSAEEIPPSGARNSETVSHRHDDDVEEGEILEEDGLSGEIENKVGDSGSISDSDSGELKMAGSKDVQSDKLDMKHLVEEIPSVHLNESVRTSASNSLTKEYDVSNVPFTTNVGSDGKEKGLCKDSMDELVVNFGKYTMAHGHGNHISCHQPVSPNDGGRHQKQCDDDELDIDRSKSILQRYNSSSESTGDKHNTSRSHHKYHDEYVCRSPTRSRSHARERSLSHSTVEEDSRGRKRLSDEGVNDVYAEKRKTKYGVDDGSRESRHQSRDIEERSASFSCRYNGMEDRHRSKERSDRERSTDGDRDLRRRRKRERSMEMDVDRVCRREKERVRSKDRDVGHGHHRERDQERRLEKERTIDEERGRSRERDGDMDWRAENRRSRSRDTERERRRDKERYSRRDKERDRSSDARLDRDRRMEKDRNRIRERERDTWRDGDRVRERDQQDWYREIAKDREMLSNKNSRNSKLDDTKYLWDRRRHPEAEKARNFSSNSVEESEKQKREEVEHEDFDENVALKFSDQEEDDLNKIKEESRRRREAILEKYKMQKLQQPMNVESQDLEKDKGPVKGGDGSPDNLDDRVDDVDVCVEEASFSVGKSPPHNGNVVPGRSSGAGGLGEGTPKSERSDDKFCDDIFGDTPTGVRKTGTEEGMRIERSGLNDNWDDAEGYYGYRFGEILDGRYEVTAAHGKGVFSTVVRARNLRPGNGEPDEVAIKIIRNNDTMYKAGMDELVILKKLVGADPDNKRHCVRFLSSFKYRNHLCLVFESLQMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLQYDHPLDMWSVGCCLYELYTGKVLFPGPTNNDMLRLQMELKGTFPKKMLRKGAFTQEHFDQDLNFHATEEDPVTKKTIKRMILNIKPKDIGSIISGSPGEDPKMLLNFKDLLDKMFTLDPDKRLTVSQALNHPFITGK* 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00561 1053 MobiDBLite consensus disorder prediction 611 634 - -
Pte10g00561 1053 MobiDBLite consensus disorder prediction 21 42 - -
Pte10g00561 1053 MobiDBLite consensus disorder prediction 1 20 - -
Pte10g00561 1053 Gene3D Phosphorylase Kinase; domain 1 705 794 - -
Pte10g00561 1053 FunFam serine/threonine-protein kinase PRP4 homolog 705 794 - -
Pte10g00561 1053 ProSitePatterns Serine/Threonine protein kinases active-site signature. 862 874 IPR008271 GO:0004672|GO:0006468
Pte10g00561 1053 MobiDBLite consensus disorder prediction 601 634 - -
Pte10g00561 1053 ProSiteProfiles Protein kinase domain profile. 735 1050 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00561 1053 SMART serkin_6 735 1050 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00561 1053 MobiDBLite consensus disorder prediction 245 329 - -
Pte10g00561 1053 SUPERFAMILY Protein kinase-like (PK-like) 722 1052 IPR011009 -
Pte10g00561 1053 Pfam Protein kinase domain 737 1050 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00561 1053 MobiDBLite consensus disorder prediction 234 475 - -
Pte10g00561 1053 MobiDBLite consensus disorder prediction 537 573 - -
Pte10g00561 1053 MobiDBLite consensus disorder prediction 1 124 - -
Pte10g00561 1053 CDD STKc_PRP4 734 1050 IPR044092 GO:0004674|GO:0006468|GO:0045292
Pte10g00561 1053 FunFam Serine/threonine-protein kinase PRP4 homolog 795 1051 - -
Pte10g00561 1053 PANTHER DUAL SPECIFICITY PROTEIN KINASE 432 1051 - -
Pte10g00561 1053 MobiDBLite consensus disorder prediction 336 475 - -
Pte10g00561 1053 MobiDBLite consensus disorder prediction 648 699 - -
Pte10g00561 1053 Gene3D Transferase(Phosphotransferase) domain 1 795 1051 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00561 Pte-Chr10 5070497 5080218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00561 723 1050 MAP Kinase Gene Family AT2G43790 32.081 1.19e-27 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Pte10g00561 Pkinase 5.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00561 K08827 - qsa:O6P43_025695 1056.59