Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00559 ATGGGGTTTTCATGGTTAGGTTCTCCATCAACATGCAGGAAGAAGCGCAGACACTATCAATCCTTTCAGCGTAATGGTGTTAAGATATCTGTTCATGATTTTGTATATGTTTTAGCAGAGGAGCACAAGCGCCTCGTTGCATATTTGGAAGACCTGTATGAGGATTCCAGAGGCAACAGGATTGCAGTGGTACGCTGGTTCCACAAAGTAGATGAGGTTGGTATTGTTTTACGTCACAGTTTTAATGACAGAGAGATTTTCTTTTCTCTTTGTCTTCAAGATCTGAGCATTGAATGCATAGATGGATTGGCGACTGTACTCAGCCCCCAAGATTTCAGAAAATTTCAGAATGAAGCATCCCACACTTTGCTGAAACCTTACTTATGCAAGCATCAATTTGAGGATGATGAAATAAAACCATTTGATATAACTCGAGTTGAGGGTTACTGGAGACAGAAAATTGTGAGGCACTTCCATAAACGTAATGATTCAAAGTCTTCTAGGAGTTCTCACCTATCTGATTCTACCATGAAGGCTGATGAAGAACAAAAAATTTCAGTTGAACTGAGATCCAGGAAGAGACTTCGCTTGTCCAGTGCTGATGGTAAATGTTTCATAGGTGTGGCTGATTCCAATTTGCAAAATGTGAGCAACAGTGGCGTCGACATTAAAGGAGTTTCTTTGATTGCTTCAAAGCAAAATGGTGCTGTGTCACCACTTTTAACCAAAGAGACTTGTCAAAATGCTTGTTTAAAAGTTTCTTGCCAAGTTGAAGTCCTTTCTCAAGACAGTGGAATCAAAGGATGTTGGTTTAGAGCTTTGGTTACCAAGATAAGTGGAAACAAAGTGAAAGTGCAGTACCAAGACCTATCAGATGCAGATGATGAGGCCAAGAAACTCGAGGTATGGATCTTAGCTTCTAAGGTTGCAGTACCTGATGATCTGGGTATTCGAGTGCATGGAAGGAGTAGAATCCGTCCAGCTCCTCATTCTAAACAAGACATGATTCTTTCAAATTTTGCGGTGGGTTCAATTGTGGATGTGTGGTGGCATGATGGGTGGTGGGAAGGCATTGTAGTCGATAAAGATGGAGATAATTTTCGTGTTTATTTTCCTGGTGAGAAGCAGATATCCACTTTTAGAAGTAACGACCTGAGACAGTCTCAAGAATGGAACGGAGATGAGTGGACATTATTGAATCCTAAGCCTGAATTGGTGCCATCCATATTATTTATCTTGGAAAGGAACCAAGTTGCTTGCAAATCATTTCACTTACGCAACCATGAAGATGACCTGGCAAATAAAACTGAAGACGGGAGTAAAGATTCTTCTTTGGATGCTCAGGTGATTAGCAATTCCAGACAGTTAGGGCTGCTGCAAGATTTGGCAAAAGATGATCGTTTTCCGCAGTTGAGGTGGAAGTCTTCTAGGAAGAGGAAGTCTAAAAGTAATTCTTTTCGTAAAACAAATAATCCTAATCACAATAGAAAGTCCCTCAACGTTTTTGAATCCCATGGGTCAAATAATTTTGCGGTTCCTTCATCAGCGAAGGTTGATCATGAGGACTGCAAATACGGAGGGGAACATATAATTAAAAGTTTAAGAATATAA 1611 0.4029 MGFSWLGSPSTCRKKRRHYQSFQRNGVKISVHDFVYVLAEEHKRLVAYLEDLYEDSRGNRIAVVRWFHKVDEVGIVLRHSFNDREIFFSLCLQDLSIECIDGLATVLSPQDFRKFQNEASHTLLKPYLCKHQFEDDEIKPFDITRVEGYWRQKIVRHFHKRNDSKSSRSSHLSDSTMKADEEQKISVELRSRKRLRLSSADGKCFIGVADSNLQNVSNSGVDIKGVSLIASKQNGAVSPLLTKETCQNACLKVSCQVEVLSQDSGIKGCWFRALVTKISGNKVKVQYQDLSDADDEAKKLEVWILASKVAVPDDLGIRVHGRSRIRPAPHSKQDMILSNFAVGSIVDVWWHDGWWEGIVVDKDGDNFRVYFPGEKQISTFRSNDLRQSQEWNGDEWTLLNPKPELVPSILFILERNQVACKSFHLRNHEDDLANKTEDGSKDSSLDAQVISNSRQLGLLQDLAKDDRFPQLRWKSSRKRKSKSNSFRKTNNPNHNRKSLNVFESHGSNNFAVPSSAKVDHEDCKYGGEHIIKSLRI* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00559 536 MobiDBLite consensus disorder prediction 486 505 - -
Pte10g00559 536 Pfam BAH domain 28 135 IPR001025 GO:0003682
Pte10g00559 536 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 225 495 - -
Pte10g00559 536 Pfam Agenet domain 255 329 IPR008395 -
Pte10g00559 536 CDD Tudor_Agenet_AtDUF_rpt1_3 251 329 - -
Pte10g00559 536 SMART agenet_At_2 249 315 IPR014002 -
Pte10g00559 536 SMART agenet_At_2 338 393 IPR014002 -
Pte10g00559 536 Gene3D - 1 143 IPR043151 -
Pte10g00559 536 SMART BAH_4 27 144 IPR001025 GO:0003682
Pte10g00559 536 MobiDBLite consensus disorder prediction 474 505 - -
Pte10g00559 536 ProSiteProfiles BAH domain profile. 27 144 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00559 Pte-Chr10 5059299 5064228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00559 261 392 PHD Transcription Factor Family AT5G58610 30.435 3.43e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00559 - - qsa:O6P43_032763 542.347