Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00538 ATGAACTACACCACCCACAACGTTCCCGCATGTTACTACCACAGCCATCGCAGGCAAAAGGATCAAAAGGTGTTGGTCATCCTGGGGGCAACAGGTACAGGAAAGTCTCGTCTGTCCGTTGACCTAGCTACCAGATTCTTCCCTAGCTCAGAAATCATAAACTCCGACAAAATGCAAATGTACAGAGGCCTTGACATCACAACCAACAAGATCTCCATGGACGAACGCCGTGGCGTCCCGCACCATCTTCTTGGTCAATTCGACCCGGTTGAAGGAGAAGTCAACCCTGCACATTTTCGTTCCGTGGGTGCCTCGGTCATTGCCCAAATCGCTTCAAGAAGTAACCTGCCCATGATCGTTGGCGGGTCCAACTCGTTCATTCACTCACTGCTAGTGGACTCCTTCTATCCTGACTCAGACCCCTTCCACGAATCTTCACCCTCGTGTTCGATCTCGTCCGAGTTGAGATACAAGTGCTGCTTCCTATGGGTGGACGTGTCCTTCCCTGTGCTATCGGATTATCTATCCAAACGAGTAGATGACATGCTCGACTTGGGAATGGTGGAGGAGTTGGCCGATTTTTACGACCCGGAAGCAGACGATTTAGAACGAGAATCTGAGAACCGGTTCGGGCTAAGGAAAGCAATTGGAGTTCCAGAGTTTGACCGGTATTTCTCAAATTACCCACCAGGGAAGGGAGTGATTGCGAAAGAAGTAATGAAAGGAAGGGCAGTGGAGGAAGGTGATGATGATCTACGGACAAGTGCATACTACGAAGCAGTGATGTCGATCAAGAAAAACACTTGTCGACTAGCAAAGAGGCAGATGAGGAAGATCCACCGGTTGAGAATGGGAGGGTGGGACCTACATAGAGTGGACGCAAGCGAGGCTTTCCAGGCGGCAATGGTGACGTCAGGTAATGGCAGCGTGAATGAGATTTGGGAGAGGGAGGTGTTGGAGCCAAGCGTGAAGATTGTGAAAGGGTTCTTGGAGGAGTAG 999 0.5045 MNYTTHNVPACYYHSHRRQKDQKVLVILGATGTGKSRLSVDLATRFFPSSEIINSDKMQMYRGLDITTNKISMDERRGVPHHLLGQFDPVEGEVNPAHFRSVGASVIAQIASRSNLPMIVGGSNSFIHSLLVDSFYPDSDPFHESSPSCSISSELRYKCCFLWVDVSFPVLSDYLSKRVDDMLDLGMVEELADFYDPEADDLERESENRFGLRKAIGVPEFDRYFSNYPPGKGVIAKEVMKGRAVEEGDDDLRTSAYYEAVMSIKKNTCRLAKRQMRKIHRLRMGGWDLHRVDASEAFQAAMVTSGNGSVNEIWEREVLEPSVKIVKGFLEE* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00538 332 Pfam IPP transferase 59 137 - -
Pte10g00538 332 Pfam IPP transferase 153 277 - -
Pte10g00538 332 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 168 289 - -
Pte10g00538 332 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 202 IPR027417 -
Pte10g00538 332 Gene3D - 22 330 IPR027417 -
Pte10g00538 332 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 22 329 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00538 Pte-Chr10 4789539 4790537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00538 156 331 C2H2 Transcription Factor Family AT2G27760 31.915 8.74e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00538 K10760 - qsa:O6P43_025717 417.927