Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00531 ATGGGGCATCAACTTGACTGCAACCAGGAAACTGGAAAACCAAACTCGTCTACCCATACCCCTTTAAAACTCTTTGGTTTTAGTGTGCAAGAAGACATGGAAGATCAAGCAACCATGATCGAAGAAGTAGTAGATTCAGTTATCACTAAGCCAACTCTCCCGTCCGGTTCACCTGATTCCGATGGTGGCCTTAGCGGTAGCGGGGGCTCTTTCCCTTCTTCTTCTTCTTCCGGTGACAGGAAGTATGAGTGTCAATACTGTTGTAGAGAATTTGCTAATTCACAAGCACTAGGTGGCCATCAAAACGCTCACAAGAAAGAGCGTCAGCAGCTCAAACGTGCTCAGCTACAAGCAACACGGAATGCTGCCGTTTCATTAGTTCGTAACCCTATAATCTCCGCCTTCGCTCCTCCACCTCACCTTTTGGCTCCGCCAGGTCAAGTGGTGGTTCCGGCACCTCCACCGTCGTGGGTATACATGCAACCACGGGCTGCTCAGCCGCCATTCCACGTGTCTCATGGTTGTGTCTTCCCTTCCACGAGTAACTCTAATAGTGCATATAGCAACAACTGTAGTAACGGTAGTATTCATAGTTCCGGAGGTAGATCTGCGGGTTCAGGGATCTTCGCATATGGTGGCAACGTAGGAGATTCAACAATGTCGTTTTCGGCAATTGGGTCGCAAGTGCATGCCGGGGTCCATGGAAGACTTGATGGACCCTCATTGAGTAGATTTTCTAAAGGTGATTGTGGGCCAAACTTCGATGATGCATTGGGTTTGGACTTACATCTGAGTCTTGCTCCAGCTGGACCGTAA 816 0.489 MGHQLDCNQETGKPNSSTHTPLKLFGFSVQEDMEDQATMIEEVVDSVITKPTLPSGSPDSDGGLSGSGGSFPSSSSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSLVRNPIISAFAPPPHLLAPPGQVVVPAPPPSWVYMQPRAAQPPFHVSHGCVFPSTSNSNSAYSNNCSNGSIHSSGGRSAGSGIFAYGGNVGDSTMSFSAIGSQVHAGVHGRLDGPSLSRFSKGDCGPNFDDALGLDLHLSLAPAGP* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00531 271 PANTHER ZINC FINGER PROTEIN 5 14 270 IPR044299 GO:0010090
Pte10g00531 271 MobiDBLite consensus disorder prediction 50 78 - -
Pte10g00531 271 Gene3D Classic Zinc Finger 69 129 - -
Pte10g00531 271 FunFam Zinc finger protein 6 72 132 - -
Pte10g00531 271 ProSiteProfiles Zinc finger C2H2 type domain profile. 82 109 IPR013087 -
Pte10g00531 271 MobiDBLite consensus disorder prediction 49 78 - -
Pte10g00531 271 ProSitePatterns Zinc finger C2H2 type domain signature. 84 104 IPR013087 -
Pte10g00531 271 MobiDBLite consensus disorder prediction 1 24 - -
Pte10g00531 271 SUPERFAMILY beta-beta-alpha zinc fingers 78 109 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00531 Pte-Chr10 4725815 4726824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00531 9 270 C2H2 Transcription Factor Family AT1G68360 43.793 1.67e-55 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00531 - - qsa:O6P43_032725 297.36