Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00528 AACATCAAAGCGGCTTCAGATGCAAACAATAAGCTCACTTCTTGGAACGCCAGTGCTGACATGTGCACTTGGTTTGGTGTCTCTTGTTACCGCAACCGAGTCTCAAAGCTCGTTCTTGAGAACCTTGACCTTCATGGTTCGTTGGCCCCTTTCACTTCATTAACTCAGCTTCGAGTTCTCAGTCTCAAGAGGAACAGACTCACTGGACCCATTCCCAGTTTGGCTAACTTCACGTCTCTTGTGCTTTTGTTTCTTTCTTACAATGACTTCAACGGTGGGTTCCCGGAAAGTGTGACTTCGCTCTTCCAGCTGTACCGTCTTGATCTTTCTCACAACAACTTGACGGGGAGCATCCCGCCTACAGTAAACCGGTTGAAGCATTTGCTTACTCTCCGATTGGATAATAACCGGTTTTCGGGTCAAATTTCGGGTTTGAACCTCCCTAATATTCAAGACATCAATGTCTCGAGAAACCGTCTGGCTGGTGAAATACCCAAATCTCTGTCGGCATTTCCAATATCTGCTTTCGCCTTAAACCCTTCTCTCTGTGGTCCTCCATTACAGAAATGTAAAGACCAGAGTGGTACCGGTCGAGTGAGCCCAATTGTCCTCATCGCCATTATCCTCAGCGATGTTTTGGTTTTAGCCGTGGTTTCTCTTCTTCTGTACTGCTACTTTTTGAGGAACTACTCAGCTAAGTTGAACGATGGGAAGCGTTCGAAACTCATGGAAAGTGAGAAGATTGTGTATTCCTTAACTCCATACCCGTCTCAACCTGGGTTTGGAAGAGGTCGGATGGTGTTTTTTGAAGGTGTGAAAAAGTTCGAACTTGAAGACTTGCTTAGAGCATCAGCAGAAATGTTGGGCAAGGGTGGGTTTGGGACAGCTTACAAGGCTGTTCTTGATGATGGCTACATCGTTGTTGTGAAAAGACTCAAGGATGCTCAAATCGGCGTGAGGAGAGAGTTTGAGCAACATATGGAAGCGTTGGGAAGGCTCAGACATCCAAACATTGTTAGCCTGAGAGCTTATTACTTTGCCAGTGAAGAGAAGTTGCTGGTATATGATTACATGACCAATGGCAGCTTATTTTGGCTGCTTCATGGCAACAGAGGACCTGGAAGGATCCCTTTAGACTGGACCACAAGGCTAAAGATTGCAGCTGGTGCAGCGAGAGGTCTGGCCTTTATTCACAACTCATGCAAGTCACTCAATATTACCCATGGTAATATAAAATCCACGAACATCTTCTTGGATAAAGCTGGGAATGCACGTCTTTCAGATTTTGGGTTGTCCATCTTTGCAATACCTACACGTGCAGCTCCTAGACCCAATGGCTACAGAGCTCCTGAAGCATTGGACGTTAGAAAACACACCCAGAAGTCTGATGTGTACTCTTTCGGTGTCCTTCTGCTGGAGCTGCTCACGGGGAAGTGTCCCTCTGTTGTGGACAGTGGTGGGCCTGGAAGTGGCTACGGTGGTGGTCCTGTTGATCTTCCAAGGTGGGTACAGTCCGTGGTTAGAGAAGAATGGACGGCTGAGGTTTTCGATTTGGAATTAATGAGGTATAGGGATACTGAGGAAGAGATGGTGGGCTTGTTGCAGATTGGAATGTCCTGTACTGTAGTATCACCTCATCAACGGCCCTCTATGAGCCAAGTGGTCAAGATGATCGAGGAGATACGTGGAGTCGAGGTGTCACCATGCCATGACACTTTGGATTCAGTTTCTGAGTCACCTTCAATGTCAGAA 1752 0.4675 NIKAASDANNKLTSWNASADMCTWFGVSCYRNRVSKLVLENLDLHGSLAPFTSLTQLRVLSLKRNRLTGPIPSLANFTSLVLLFLSYNDFNGGFPESVTSLFQLYRLDLSHNNLTGSIPPTVNRLKHLLTLRLDNNRFSGQISGLNLPNIQDINVSRNRLAGEIPKSLSAFPISAFALNPSLCGPPLQKCKDQSGTGRVSPIVLIAIILSDVLVLAVVSLLLYCYFLRNYSAKLNDGKRSKLMESEKIVYSLTPYPSQPGFGRGRMVFFEGVKKFELEDLLRASAEMLGKGGFGTAYKAVLDDGYIVVVKRLKDAQIGVRREFEQHMEALGRLRHPNIVSLRAYYFASEEKLLVYDYMTNGSLFWLLHGNRGPGRIPLDWTTRLKIAAGAARGLAFIHNSCKSLNITHGNIKSTNIFLDKAGNARLSDFGLSIFAIPTRAAPRPNGYRAPEALDVRKHTQKSDVYSFGVLLLELLTGKCPSVVDSGGPGSGYGGGPVDLPRWVQSVVREEWTAEVFDLELMRYRDTEEEMVGLLQIGMSCTVVSPHQRPSMSQVVKMIEEIRGVEVSPCHDTLDSVSESPSMSE 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00528 584 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 3 563 IPR046959 -
Pte10g00528 584 Gene3D Transferase(Phosphotransferase) domain 1 358 574 - -
Pte10g00528 584 Pfam Protein kinase domain 286 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00528 584 FunFam pollen receptor-like kinase 1 256 357 - -
Pte10g00528 584 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 358 568 - -
Pte10g00528 584 SUPERFAMILY Protein kinase-like (PK-like) 286 559 IPR011009 -
Pte10g00528 584 SUPERFAMILY L domain-like 13 171 - -
Pte10g00528 584 Gene3D Ribonuclease Inhibitor 2 144 IPR032675 -
Pte10g00528 584 FunFam Nuclear pore complex protein NUP107 2 144 - -
Pte10g00528 584 ProSitePatterns Protein kinases ATP-binding region signature. 288 310 IPR017441 GO:0005524
Pte10g00528 584 Gene3D Ribonuclease Inhibitor 145 191 IPR032675 -
Pte10g00528 584 ProSiteProfiles Protein kinase domain profile. 282 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00528 584 CDD STKc_IRAK 288 561 - -
Pte10g00528 584 Gene3D Phosphorylase Kinase; domain 1 263 357 - -
Pte10g00528 584 Pfam Leucine rich repeat N-terminal domain 5 29 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00528 Pte-Chr10 4710215 4712996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00528 1 584 Receptor kinase-like Gene Family AT1G68400 62.085 0.0 742
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte10g00528 Pkinase 1.9e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00528 - - qsa:O6P43_032719 875.159