Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00520 ATGTCGACTGAGAAGGAGAGAGAAACCCAGGTTTACATGGCCAAACTTTCTGAACAGGCCGAGAGATATGAAGAAATGATTGAGTGTATGAAGAAAGTTGCAAAACTTGATTTGGAGCTCACTGTGGAAGAGAGAAACCTACTCTCTGTTGGATACAAAAATGTCATTGGTGCCAGGCGAGCTTCTTGGCGGATCATGTCCTCAATTGAGCAGAAGGAAGAGTCCAAGGGAAATGAGAACAATGTCAAACTCATCAAGAGTTACCGCCAAAAAGTTGAGGAGGAACTTAGCCAGATCTGCAATGACATTCTGTCAATCATTGATAAGCATCTTATTCCTGCTTCTACCAGTGGGGAAGCCACTGTTTTCTACTATAAAATGAAAGGAGACTATTACCGATACCTTGCCGAGTTCAAGGCTGACCAAGAAAGGAAAGAGGCGTCTGAGCAATCACTCAAAGGATATGAGGCTGCTTCTGCTACTGCTAGTACCGATCTTCCATCGACTCACCCGATCCGTCTTGGACTCGCACTCAATTTCTCGGTCTTCTACTATGAGATAATGAATTCTCCTGAAAGGGCTTGTCATTTGGCTAAACAAGCTTTTGACGAGGCAATTGCAGAGTTGGATACATTGAGCGAAGAATCATACAAGGATAGCACCCTGATCATGCAACTTCTGAGAGACAACCTCACTCTCTGGACCTCCGATTTGCCTGAAGATGGAGGTGATGAGAACTTGAAAGCAGAAGAATCCAAACCTGCTGAACCCCAGACTTGA 780 0.4449 MSTEKERETQVYMAKLSEQAERYEEMIECMKKVAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENNVKLIKSYRQKVEEELSQICNDILSIIDKHLIPASTSGEATVFYYKMKGDYYRYLAEFKADQERKEASEQSLKGYEAASATASTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGDENLKAEESKPAEPQT* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00520 259 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Pte10g00520 259 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Pte10g00520 259 Gene3D - 1 248 IPR036815 -
Pte10g00520 259 Coils Coil 13 33 - -
Pte10g00520 259 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Pte10g00520 259 Coils Coil 195 215 - -
Pte10g00520 259 FunFam 14-3-3 protein epsilon 1 249 - -
Pte10g00520 259 PIRSF 14-3-3 1 247 IPR000308 -
Pte10g00520 259 MobiDBLite consensus disorder prediction 237 259 - -
Pte10g00520 259 PANTHER 14-3-3 PROTEIN 7 237 IPR000308 -
Pte10g00520 259 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Pte10g00520 259 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Pte10g00520 259 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Pte10g00520 259 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Pte10g00520 259 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Pte10g00520 259 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Pte10g00520 259 SMART 1433_4 7 248 IPR023410 -
Pte10g00520 259 Pfam 14-3-3 protein 13 235 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00520 Pte-Chr10 4657771 4661587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00520 2 253 14-3-3 family AT1G26480 86.905 1.08e-166 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00520 - K06630 qsa:O6P43_032920 485.337