LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte10g00509	ATGGGTCTCAGTCTTAGTCCGCAGCTCTGTTTGTCTGTGATCTCCGTTATTCTACTTCTCTACCAAGCACAGATCTCTCAAGCCAAACCTCATTTTGATACCCATCAGTTTGGACCCTTTAACTATTCTTACTACCAAACCTTTAAAGTCGTACCTTCAGCAGGAATCAGCAACGAAGCACTTCAAGTGACCCCTGACTCTCGTGGTAACTACACCCTTACAAACAACTCTGGTCGTGTTTTATTTGACAGACAATACAAGCTTTGGGAAGCTGGAGTCAATGGAAAGGTTGCTTCTTTCAGCACCTCATTTCTCATCAACATTTTTCGTGTCAATGAATCAGTTCCAGCAGCGGAAGGGCTTGCCTTCTTGATCGCACCAGACGCAGTGGTACCAGCAAATAGTTATGGGAAGTATCTGGGTTTGACAAACTCCACCATGGATGGCAACGCAAATAACCATTTTGTTGCTGTTGAATTAGATACGTTCAAGCAAGACTTCGATCCAGATGATAATCACATTGGACTTGACATCAACAGTGTAGTGTCCAAAACCTATGTTTCTCTGGACAAGTTTGGAATCAAGCTGGCGCCCGTAGGTACAAAGTTTTATGTGGTATGGATTCAGTACGATGGCAATACCAAGGTACTGTATGTTTATATTGCAGAACAGCCAGATAGGAATGCACCCATTGTAGCCAGACCTGATAAGCATGTTTTGAAAGCACATCTCGATCTCAAAGCCGTTAAGCAGAGTTCTTACTTTGGTTTTGCAGCATCCACTGGGAATTTTTATGAGTTGAACTGTGTGTTGAAATGGAATCTTACGGTAGAGATCTTACCACGGGATGATGGGAAAAATGCGATGAGGATTGCTTTGGGAATAGGTCTACCAATTTTCGCGTTGCTGTTGTTGGGGGTTGCTGGATTTGGTTATTACTTGTACAGGAAAAAGGTCAGGGCCTCAGACCCTAATATTTTGGGTGCCCTTAAGAGTCTTCCTGGTGTTCCAAGAGAGTTTAGCTTCAAAGATCTAAAGAAGGCCACACACAACTTTGATGACAAGAACAAACTTGGGGAAGGTGGGTTTGGTGTGGTCTACAAAGGTGTGCTGCCAAAGGAGAAGTTAGAGATTGCTGTCAAGAAATTTTCTAGAGACGACATAAAAAGCAAAGATGATTTCTTGGCTGAGCTAACCATTATTAATCGACTTCGTCACAAGCATCTCGTTCGTTTACTTGGATGGTGTCACAAAAATGGTGGGTTGCTATTGGTGTACGAGTTCATGCCTAATGGAAGCTTAGACACTCACCTATTCACTGAGCCAGGAACAAGCACAAGCACCATAAGGTGGCAAGTAAGGTACAAAATAATTTCTGGGGTGGCATCTGCTTTGCACTATCTACATGATGAGTATGACCAGAAAGTTGTGCATAGGGACCTAAAGGCCAGTAACATCATGCTAGACTCACATTTTAATGCTCGTTTAGGAGACTTCGGTTTGGCCCGTGCTTTAGAGCATGAGAAAACATCGTATGCAGAACTATCAGGTGTTCCTGGGACCATAGGTTACATTGCCCCAGAGTGTTTCCATACTGGTAAAGCAACATGTGAGTCAGATGTATATGGGTTTGGTGCTGTATTACTGGAAGTAGTTTGTGGTCAAAGGCCATGGACAAGCAATGGGGGCTTTCAGTTCTTGGTGGACTACGTCTGGTACTTGCATCGCGATGGACGAATTTTGGAGGCAGTAGATAAGAGGTTAGAGAATGAATATGTGGTTGAAGAAGCAGAGAGGCTTCTGCTATTGGGGCTGGCATGCTGTCATCCTTCTCCAAGTGACAGACCAAACACCCAGGAAATTGTTCAAATGATATCTGGATCAGTGTCTGTGCCTCATATCCCGCCATTCAAGCCATCGTTTGTGTGGCCATCAACGCCAGTAGGAAGCTACATCACTGATTTTACAACAAGAAGCTCAGATGTAACCCCCACAAACACTTCATCTTTCCAAAATAGATGCATTGACAGAAATTAA	2037	0.4359	MGLSLSPQLCLSVISVILLLYQAQISQAKPHFDTHQFGPFNYSYYQTFKVVPSAGISNEALQVTPDSRGNYTLTNNSGRVLFDRQYKLWEAGVNGKVASFSTSFLINIFRVNESVPAAEGLAFLIAPDAVVPANSYGKYLGLTNSTMDGNANNHFVAVELDTFKQDFDPDDNHIGLDINSVVSKTYVSLDKFGIKLAPVGTKFYVVWIQYDGNTKVLYVYIAEQPDRNAPIVARPDKHVLKAHLDLKAVKQSSYFGFAASTGNFYELNCVLKWNLTVEILPRDDGKNAMRIALGIGLPIFALLLLGVAGFGYYLYRKKVRASDPNILGALKSLPGVPREFSFKDLKKATHNFDDKNKLGEGGFGVVYKGVLPKEKLEIAVKKFSRDDIKSKDDFLAELTIINRLRHKHLVRLLGWCHKNGGLLLVYEFMPNGSLDTHLFTEPGTSTSTIRWQVRYKIISGVASALHYLHDEYDQKVVHRDLKASNIMLDSHFNARLGDFGLARALEHEKTSYAELSGVPGTIGYIAPECFHTGKATCESDVYGFGAVLLEVVCGQRPWTSNGGFQFLVDYVWYLHRDGRILEAVDKRLENEYVVEEAERLLLLGLACCHPSPSDRPNTQEIVQMISGSVSVPHIPPFKPSFVWPSTPVGSYITDFTTRSSDVTPTNTSSFQNRCIDRN*	679

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte10g00509	678	CDD	STKc_IRAK	358	625	-	-
	Pte10g00509	678	ProSitePatterns	Legume lectins beta-chain signature.	156	162	IPR019825	-
	Pte10g00509	678	FunFam	probable L-type lectin-domain containing receptor kinase S.5	429	630	-	-
	Pte10g00509	678	Gene3D	Phosphorylase Kinase; domain 1	337	428	-	-
	Pte10g00509	678	Gene3D	-	31	290	-	-
	Pte10g00509	678	PANTHER	-	62	635	-	-
	Pte10g00509	678	Pfam	Legume lectin domain	40	280	IPR001220	GO:0030246
	Pte10g00509	678	ProSitePatterns	Protein kinases ATP-binding region signature.	358	382	IPR017441	GO:0005524
	Pte10g00509	678	MobiDBLite	consensus disorder prediction	659	678	-	-
	Pte10g00509	678	Pfam	Protein kinase domain	353	623	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte10g00509	678	FunFam	probable L-type lectin-domain containing receptor kinase S.5	337	428	-	-
	Pte10g00509	678	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	476	488	IPR008271	GO:0004672\|GO:0006468
	Pte10g00509	678	SUPERFAMILY	Concanavalin A-like lectins/glucanases	40	280	IPR013320	-
	Pte10g00509	678	ProSiteProfiles	Protein kinase domain profile.	352	634	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte10g00509	678	Gene3D	Transferase(Phosphotransferase) domain 1	429	631	-	-
	Pte10g00509	678	SMART	serkin_6	352	625	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte10g00509	678	CDD	lectin_legume_LecRK_Arcelin_ConA	40	277	IPR001220	GO:0030246
	Pte10g00509	678	SUPERFAMILY	Protein kinase-like (PK-like)	334	661	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte10g00509	Pte-Chr10	4558799	4561975	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte10g00509	52	640	Receptor kinase-like Gene Family	AT3G53810	38.684	1.49e-121	375

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Pte10g00509		Pkinase	1.8e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte10g00509	-		-	qsa:O6P43_033478	907.901