Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00506 ATGGCAACATCGGCAATGGTGAATGGAGATATATATAAAGCTCACATGTCTTTGGCTTTCGTACAGCTTTGCTCTGGAGGGTACCATGTCATCACCAAGGTCGCCCTTAATGTTGGTGTCAGTAAATTGGTCTTTTGTGTCTTCCGAGATCTCCTTGCCGTTTCTATTCTTGCTCCCGTCGCTTATGTCCGTGAAAAGCAGACTAGACCACCTATCACCAGGCACCTCCTTCTATCATTCTGCTTTCTTGGATTAACGGGGATATTTGGCAACCAGCTTTTGTTTCTTATTGGTCTAAGCTATACAAATCCAGCATATGCTGCGGCCGTACAACCTGCCATCCCAGTCTTTACATTGATTCTGGCTTTAATTATGGGCACAGAAAAAGTGAACATATTTAGAGCGGATGGTCAGGCAAAATTTGCAGGCACATTTGTCTGTGTCTCTGGTGCTATGTTGATGGTCATGTATCGAGGTCCAGCTTTGTTTGGGTATTCTGAAACAGAAAATCTAGCACAGAGTGACATTAGTGCTAGAGGGCAACCTGAATCGTCTGGGTGGTTAAAGAGTGGATTGCAAGATCTTAGGTTCGACAATTTTCACCTCGGGGTTATATGCTTGATAGGGAACTGCATTTGCATGGCTGCTTTTATATCCATACAGGCTCGTGTATCAAAAAAATATCCTGCCAACATATCTCTTACGGCGTACTCATATCTTTCTGGAACAGCATTTATGTTGGTAACAGCTTTCTTCGTCACAACTGATTCAAAAGACTGGAGTTTGACACAGTCTGAACTAATAGCCGTCATTTATGCTGGCAGTGTCTCATCCGCTCTTAGCTATGGACTGCTGATATGGGCCAATAAAATCTTGGGACCTGCTTTGGTTGCTCTTTATTTTCCACTTCAGCCTCTGGCTTCTGCTAGCCTGTCACGACTTTTTCTCGGAAGCCAAATTTATCTGGGAAGTGTCCTAGGGGGATCTTTGATCATTGGTGGTCTATACTTGGTCACCTGGGCATCATTCAAGGAAAGACAAGTCGCTGTTGGAGTGATCCCTCAAGCATCAGGGCTTTCTGAATCTGACCCTCTCATTGCTGACAGGGATTCCATGCACAGGACTTCATATTAA 1134 0.4427 MATSAMVNGDIYKAHMSLAFVQLCSGGYHVITKVALNVGVSKLVFCVFRDLLAVSILAPVAYVREKQTRPPITRHLLLSFCFLGLTGIFGNQLLFLIGLSYTNPAYAAAVQPAIPVFTLILALIMGTEKVNIFRADGQAKFAGTFVCVSGAMLMVMYRGPALFGYSETENLAQSDISARGQPESSGWLKSGLQDLRFDNFHLGVICLIGNCICMAAFISIQARVSKKYPANISLTAYSYLSGTAFMLVTAFFVTTDSKDWSLTQSELIAVIYAGSVSSALSYGLLIWANKILGPALVALYFPLQPLASASLSRLFLGSQIYLGSVLGGSLIIGGLYLVTWASFKERQVAVGVIPQASGLSESDPLIADRDSMHRTSY* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00506 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 157 - -
Pte10g00506 377 PANTHER WAT1-RELATED PROTEIN 16 346 IPR030184 GO:0016020|GO:0022857
Pte10g00506 377 Pfam EamA-like transporter family 19 155 IPR000620 GO:0016020
Pte10g00506 377 Pfam EamA-like transporter family 202 339 IPR000620 GO:0016020
Pte10g00506 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00506 Pte-Chr10 4547845 4551649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00506 4 286 Nodulin-like Gene Family AT3G45870 61.484 7.17e-116 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00506 - - gmx:100787738 515.768