Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00482 ATGTCACTTATTGGTCGGTTCTTCTACAGAAGGCCCCCTGATGGGTTGCTTGAATTTGCCGATAGAATATACGTTTTCGATTCATGCTTCTCAACTGAAGTGTTGCCGGAAGGAATGTACCAAATATATCTGTATGAAATCATTATGGAATTGTATGAAGAGTTCCCAGACTCATCATATCTCGCTTTCAATTTCCGGGAAGGTGAGAAACGGAGCCAATTTGCTGAAATTCTTTGTCAATACGATGTTACTGTATTGGATTATCCTAGACAATATGAAGGTTGCCCCCTGCTACCCTTAACCATTGTTCAACACTTTCTTCGTGTCTGCGAGAGCTGGCTTTCAAAGGGAAATCAACAGAATTTTATTCTACTTCATTGTGAAAGAGGGGCTTGGCCTCTCTTGGCTTTCCTTTTAGCTAGCCTCTTAATTTTCAGAAGGTCGCATAGTGGCGAGCGTAGAACTCTTGAAATGGTGCACAAAGAAGCTCCAAAAGGACTTTTACAGCTCTTGTCACCTTTGAATCCTTTACCGTCTCAGCTTCGCTACCTTCAGTATGTAGCAAGAAGGAATATCTCTCCGGAATGGCCACCTCCAGAAAGAGCTCTTTCTTTAGATTGTCTCATTCTTCGAGCTGTTCCTAGCTTTGATTCTCAGAAGGGGTGCAAACCTATTATCCGAATATTTGGTAGGAATGCTCACAGTGGAGGCGGGCTCTCAACTCAGATGCTTTACTCCATGCAGAAGAAGAAGACCTTGCGACATTACCGCCAGGCAGACTGTGATGTGATCAAGATTGACGTCCAGTGTCTGATACAAGGAGATGTAGTGCTGGAGTGTGTCCATTTGGATATTGAACCTGAAAGGGAAATAATGATGTTCCGAGTAATGTTCAATACTGCATTCATTCGATCAAACATATTGATGTTGAATTCTGATAATTTGGACCTTCTTTGGGATTCAAAGAGTCGTTATCCTAAAGGCTTCAGGGCAGAGGTATTGTTTGGGGAAGTTGAGAGTATATCTCCTCCAAAAGCTCCTGCAAATATTTTGAGTGGTGAGGATAACGGTGGATTGCCAGTGGAAGCCTTTTCTAGGGTTCAAGAACTTTTTAGTGGCGTGGAATTGGTTGATGGCGGTGATGATGTAGCATTGTGGTTTCTTAGACAACTTTCTGTCCTAAGTGATGCAAAAGATTATTCTAGGATGCAAAACAAATCTAATGTATATTTATCACCTGCTGATTCTGAAGATGAAAATAATGTCTCAAGCTCTGCAGATAGTTCAGACGAAGCATTTGATGTCCAAAAATTTGTGGCTGATCCATCTGCAGTGATGCCTGAAACTTATGATTCATTTAATTCCACAGATGAAGTTGATACCGGAGATCATATAACGCCTATTTCAACACTTGAACAAGCATCCACTGAATGTACTCCATCTGTACTCAAGGAAAAGTCAGCTCTACATAGTGTAGAAACTCTGACTAGTTTATCCTCTGTGTCTCCTCACCTAGCTCTCGTCCCTCAGCATCAACCTCCACAACCGCGGCCGCCGCCACCTCTGCCACCACAACCTCTGTCTGCTATTGACATTGCTGCACAATTAGCATCTGCTGATCCCAGTAGAGATCCCCTGATACATGCAGCTTCCACTTCTGATGGAGATCCTCCATCCTCTTTGAATACCATAAGTACTACTTCAGCAATATCTGATGAAAGTAAAGGACATCCACCGCCACCGCCACCGCCACCGCCGCCTCTGCCTCCACTTCATTTTTCTAGCAAAGCATCTCCACCATCGCCACCATGTCCTCCACCACTGCCACCGCCTCCACCAATACCTTTCAGTTCCTCTATTACTAGTGATCACACTTCATCAGTGCCTCTGCCATCAACCATTCTTCCTCCAAAGTTGCCCCATGCAAGTTCAATATCCGCTGCTACATCAGTTCAAGGAGCAGTCCCTCCTCCTCCTTGCCCACCTCCTCCTTTGAGTCAGAGTACCAAAAGTGCTTCAAGAGCACCCACTCCTCCACCACCTCCACCTACTGTTGGATGTACTGGTCCTCCAAGGCCACCACTACCGCCACCTCCTCCCCCTCCATCAGGACCTTCAAGACCTGCTTCTGTTCCTCCACCTCCACATCCAGTGCCAAAGCCTCCTGGGGTTCCTCCTCCACCACCTAGTCAGGGTTTGGCACCTGCTCCGCCACCGCCTCCTGTATCAAATGGTCTTGGTGCACTGCCTCCAGCTGCTACATCTGTTGGAAAAGGTAGAACATCTTCAACTGTCAGCCTTGGAAGAGGTAGAGGTACGCTTGGAATCACTAATTCCCCCAAGAAAAATTCCCTAAAGCCACTGCACTGGGTAAAAGTCACCCGTGCAATCCAAGGGAGTTTATGGGCTGATTCCCAGAAACAAGATAGCAAATCAAGGCCCCCTGAGATAGATATATCAGAACTTGAGAGTCTGTTTTCAGCAACCAATAACTCTGATGGAGTTGGCAACAAGGGTGCAGGTCGCCTTGGTTCCAGTATCAACAAACATGAAAAAGTGCAGTTGGTGGATTTGCGCAGAGCATATAACTGTGAAATAATGCTTTCCAAAGTTAAGATTCCGTTGCCTGAGATGATTAATGCAGTTCTCGCTTTGGATTCAGCTGCTTTGGACATTGATCAGGTAGAGAATCTCATTAAGTTCTGCCCGACAAAGGAAGAAATGGAAAAACTAAAGAATTACACAGGTGACAAGCAAATGCTTGGAAAATGCGAACAGTTTTTTATGGAGTTGATGAAGGTTCCACGGATAGAATCAAAGTTACGGGTCTTTGCATTTAAGATCACCTTCTCTAGTCAGGTGAAGGATTTGAAGTGCAATTTGAATACAATCAATGCTGCTACACGAGAGGTTAAAGAATCAGTGAAGCTGAGACAGATAATGCAAACCATTCTTACTCTGGGAAATGCTTTGAATCAAGGAACTGCAAGAGGTTCAGCTGTAGGATTCAAATTGGACAGTCTCCTTAAGCTGTCTGATACTCGTGCAAGAAACAACAAGATGACTCTAATGCATTATCTGTGTAAGGTTCTTTCTGATAAAATGCCAGAGTTAGTGGATTTCGACCAGGATCTTGTCCATTTGGAACCTGCCTCAAAGATTCAATTAAAATTATTGGCTGAAGAAATGCAAGCTATTAGTAAAGGATTGGAAAAGGTGGAGCAGGAGCTTTCCACATCAGAAAATGATGGTGTTGTATCAGCAGGATTTCGAAAGGTGCTGAAAATTTTCCTCGATACTGCTGAGGCTGATGTGAGATCACTTATATCTTTGTATTCAGAAGTGGGCAGGAATGCTGACTCCTTGTCACAGTACTTTGGGGAGGATCCAGCGCGGTGTCCATTTGAGCAAGTGACACAAATCTTGGTAGTATTCATGAGGATGTTTAATAAGTCACGAGAAGAGAATGCAAGGCAGGCTGATGCTGAAAAGAAGAAATTGGAGAAAGAAGCCATGAAAGAACGGGCAGCAACTCACACAAGTTCAACGAAAAATGGCGTGCACTAG 3567 0.4432 MSLIGRFFYRRPPDGLLEFADRIYVFDSCFSTEVLPEGMYQIYLYEIIMELYEEFPDSSYLAFNFREGEKRSQFAEILCQYDVTVLDYPRQYEGCPLLPLTIVQHFLRVCESWLSKGNQQNFILLHCERGAWPLLAFLLASLLIFRRSHSGERRTLEMVHKEAPKGLLQLLSPLNPLPSQLRYLQYVARRNISPEWPPPERALSLDCLILRAVPSFDSQKGCKPIIRIFGRNAHSGGGLSTQMLYSMQKKKTLRHYRQADCDVIKIDVQCLIQGDVVLECVHLDIEPEREIMMFRVMFNTAFIRSNILMLNSDNLDLLWDSKSRYPKGFRAEVLFGEVESISPPKAPANILSGEDNGGLPVEAFSRVQELFSGVELVDGGDDVALWFLRQLSVLSDAKDYSRMQNKSNVYLSPADSEDENNVSSSADSSDEAFDVQKFVADPSAVMPETYDSFNSTDEVDTGDHITPISTLEQASTECTPSVLKEKSALHSVETLTSLSSVSPHLALVPQHQPPQPRPPPPLPPQPLSAIDIAAQLASADPSRDPLIHAASTSDGDPPSSLNTISTTSAISDESKGHPPPPPPPPPPLPPLHFSSKASPPSPPCPPPLPPPPPIPFSSSITSDHTSSVPLPSTILPPKLPHASSISAATSVQGAVPPPPCPPPPLSQSTKSASRAPTPPPPPPTVGCTGPPRPPLPPPPPPPSGPSRPASVPPPPHPVPKPPGVPPPPPSQGLAPAPPPPPVSNGLGALPPAATSVGKGRTSSTVSLGRGRGTLGITNSPKKNSLKPLHWVKVTRAIQGSLWADSQKQDSKSRPPEIDISELESLFSATNNSDGVGNKGAGRLGSSINKHEKVQLVDLRRAYNCEIMLSKVKIPLPEMINAVLALDSAALDIDQVENLIKFCPTKEEMEKLKNYTGDKQMLGKCEQFFMELMKVPRIESKLRVFAFKITFSSQVKDLKCNLNTINAATREVKESVKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKVLSDKMPELVDFDQDLVHLEPASKIQLKLLAEEMQAISKGLEKVEQELSTSENDGVVSAGFRKVLKIFLDTAEADVRSLISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILVVFMRMFNKSREENARQADAEKKKLEKEAMKERAATHTSSTKNGVH* 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00482 1188 PANTHER FORMIN-J 690 1180 - -
Pte10g00482 1188 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 14 187 IPR029021 -
Pte10g00482 1188 MobiDBLite consensus disorder prediction 540 784 - -
Pte10g00482 1188 MobiDBLite consensus disorder prediction 411 431 - -
Pte10g00482 1188 MobiDBLite consensus disorder prediction 674 746 - -
Pte10g00482 1188 SMART it6_source 512 1186 IPR015425 -
Pte10g00482 1188 MobiDBLite consensus disorder prediction 575 617 - -
Pte10g00482 1188 MobiDBLite consensus disorder prediction 507 527 - -
Pte10g00482 1188 MobiDBLite consensus disorder prediction 1155 1177 - -
Pte10g00482 1188 Coils Coil 1056 1083 - -
Pte10g00482 1188 Pfam Formin Homology 2 Domain 779 1150 IPR015425 -
Pte10g00482 1188 Gene3D - 197 341 - -
Pte10g00482 1188 ProSiteProfiles C2 tensin-type domain profile. 200 338 IPR014020 -
Pte10g00482 1188 Coils Coil 1150 1177 - -
Pte10g00482 1188 FunFam Formin-like protein 775 1161 - -
Pte10g00482 1188 MobiDBLite consensus disorder prediction 756 784 - -
Pte10g00482 1188 MobiDBLite consensus disorder prediction 553 573 - -
Pte10g00482 1188 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Pte10g00482 1188 SMART PTEN_C2_2 198 337 IPR014020 -
Pte10g00482 1188 ProSiteProfiles Formin homology-2 (FH2) domain profile. 775 1175 IPR015425 -
Pte10g00482 1188 Gene3D Protein tyrosine phosphatase superfamily 15 191 IPR029021 -
Pte10g00482 1188 MobiDBLite consensus disorder prediction 1155 1188 - -
Pte10g00482 1188 Gene3D Formin, FH2 domain 777 1161 IPR042201 -
Pte10g00482 1188 MobiDBLite consensus disorder prediction 509 527 - -
Pte10g00482 1188 SUPERFAMILY Formin homology 2 domain (FH2 domain) 788 1169 - -
Pte10g00482 1188 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Pte10g00482 1188 MobiDBLite consensus disorder prediction 618 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00482 Pte-Chr10 4278435 4286590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00482 764 1159 FH2 protein (formin) Gene Family AT1G31810 78.535 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00482 - - jre:108991092 723.776