Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00474 ATGGCGTCAAAATTTTCCGGTGCTTACAAACAATACAAACCTTGCACAAGGTCTAGCAGTTACAGAAGAGGACGTAGACCTTACCCTGATTTTGACACTAAATCAGAGGGAGTGCCATACTCTTATCTGGGAGCAAGTTCATCTTCAACCCCTGCGTGGGATTTTACTACCGGCTACCACCACCTTGCCAAAAGATCTGACAACCGATTCACTGGTGCATTTAATGGGAACCTAACTCCGAGAGAACGGCAATCGGCATTTACACAGTCTCCTGATGGAGTGCTAGAAGATCAGCATGAACCAAAGGAGTGGATGGCTCAAGTGGAACCTGGTGTTCACATAACTTTTATCTCCCTTCCTAATGGTGGAAACGATCTGAAAAGGATTCGCTTCAGCCGAGAGATGTTTAACAAATGGCAAGCTCAAAGATGGTGGGGCGAAAATTATGACAGAATCATAGAGCTCTACAATGTCCGGAAATTCAATCGCCAAGCTCTAAGCACCCCTACAAGATCTGAGGTTGAGTACAGAGACTCTTTCTACGCAAGATTAGCTTCCGAGAGGGAGAGCCCTTTGGTGCCATCTTCATACAAAGACTGGACACCAAGACCCTATTCCAGGCCCCCTGGAAGCAACGGATATAACCCTTTTGACCAATTAGATCAAGGGGTTGCGCAATCTCTTGAAGCATCAAGGACGACAACGTCCTCCAGGGATGAGCCTTCAGTCTCTGTCAGTAATGCCAGTGAAGTTGAGGCGGAATGGGTCGAGCAAGATGAGCCTGGCGTGTACATTACAATCAGGCAGTTAAGAGATGGCACTCAAGAAGTCAAACGTGTCCGATTCAGGCAAGTTCGTGATAGATTTGATGAAGTGGATGCCAAGACGTGGTGGGAAGATAATAGAGAAAGAATACAAGCTCAATACCTTTGA 933 0.4641 MASKFSGAYKQYKPCTRSSSYRRGRRPYPDFDTKSEGVPYSYLGASSSSTPAWDFTTGYHHLAKRSDNRFTGAFNGNLTPRERQSAFTQSPDGVLEDQHEPKEWMAQVEPGVHITFISLPNGGNDLKRIRFSREMFNKWQAQRWWGENYDRIIELYNVRKFNRQALSTPTRSEVEYRDSFYARLASERESPLVPSSYKDWTPRPYSRPPGSNGYNPFDQLDQGVAQSLEASRTTTSSRDEPSVSVSNASEVEAEWVEQDEPGVYITIRQLRDGTQEVKRVRFRQVRDRFDEVDAKTWWEDNRERIQAQYL* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00474 310 Pfam Transcription factor regulating root and shoot growth via Pin3 252 309 IPR013591 -
Pte10g00474 310 Pfam Transcription factor regulating root and shoot growth via Pin3 102 156 IPR013591 -
Pte10g00474 310 MobiDBLite consensus disorder prediction 193 252 - -
Pte10g00474 310 MobiDBLite consensus disorder prediction 1 36 - -
Pte10g00474 310 ProSiteProfiles BRX domain profile. 253 310 IPR013591 -
Pte10g00474 310 MobiDBLite consensus disorder prediction 75 95 - -
Pte10g00474 310 MobiDBLite consensus disorder prediction 212 251 - -
Pte10g00474 310 ProSiteProfiles BRX domain profile. 102 157 IPR013591 -
Pte10g00474 310 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 310 IPR044532 -
Pte10g00474 310 MobiDBLite consensus disorder prediction 75 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00474 Pte-Chr10 4223782 4225559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00474 1 311 Major Intrinsic Protein MIP AT1G31880 61.875 1.33e-128 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00474 - - qsa:O6P43_025069 445.277