Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00473 ATGTCTGTATCAAAGTCATCGTTGTTTTTGGTTCGCGTGCTGCTTGTTCTAATGCAATCCTATGAACCTATTCTCTCCAAAGCAGGAGATACTATCTCAGCTGGACAATTTCTTTTAGGGAACCAGACCATAGTATCTGAACGAAACACTTTCCAACTTGGTTTCTTCAAGCCTGGCAATTACAACATGTACCTTGGCATTTCTTACAAAGACCACCCCGGTAAAAAGAATGATGTGTGGGTAGCGAACAGAAATACCCCTCTCTCTAACCAACCTTCTCTCAGGTATGGACTCTCACTTGATGGCAACCTAGTTATTACTCAAGGCTCCTCAGTGTTAAAACTGGTTTGGTCCACAAATTTGACTCATAGTTCGTTGAATTCAACAGAAGCGATACTTTTTGATTCTGGGAACTTGGTTTTGAGAGATAAACTGAACCATTCTCGTATTTTCTGGGAGAGTTTTGACCATCCAATTGATGTGTGGTTACCTGGTCAAAAACTCAGGATCAGTAAGGTTTCGGATCGTCTTCTTACATCATGGAAAAACCAACAGGATCCAACTTCAGGTATTTTTTCTCTTGGAATAGATCGGTCAAATGCTTCTAGTAGCATTGAATTGTACTTGCAGTGGAACAAGTCACTTAACTATTGGAGGAGTGGGGTTTGGAATGGACAGTACTTCAAGAATGCTCGTGATATGAAAGCCAGCGATGTTTATAACTTCACCTACATATCCACTGAAAACGAGTCTTATCTGACATATGGTGTTTCCAATCTTGATACATTAACCAAAATATATTTAGGGCATAGGGGACAGCTACAGCTTCACGTGTGGTTAGATGAGCATTGGAATTGGAAGTCACTTTGGCAAGAACCTAGATCATCTAGTGTGTATGCTTTGTGTGGAGCATTTGGCTTGTTCCACGAATATGATTCAGAACTTTGCGAATGCTTACAAGGTTTCAGTCCATCTTCTAAAGAAACAAGACTAAATGATTGGTCAAATGGTTGTGTTAGAAGATATCCTTTGAATTGTAATATCAGTGACCATGAAGCAAAGGATTGGTTTTTCAGGTTACAAAATGTGACATTGCCTGCAAATGAGAAGTACTTTTCGGCCTTCAATAATGCAAGCTGTGAAATAGCTTGCATGAGAAATTGTTCTTGCACAGCTTTTGTACATAACAGCAGTGGGTGTTTGATATGGGATGGAGTGCTTCTCAACTTGCAGCAATTCTCAGATGGCACTAATAGGCTGCAAGACATTTACCTCAAACTTTCTGCTGCTGAGATCCAACATACCCACGGTGCCAAAGACAACAGCAATAGAAAAAGAGTCTTGGAGACAATACTGCCGGTATGCATTGGGGCTCTTCTTTTAATTCTCTCCCTGTGTTTAGTATTCATCAAGGTACTCAAAGTGAAAGGGGAATCAAATGAGGATCTCCTATCGTTTGATTTCAACTCGAATCCTCAGATAGCTGATGATGAGCATGACAACCAGAGTCAGCGAAAACAAGATGTTGAGTTGCCAGCGTTCAGTTATAAGAGTGTATGCGCTACGACAGATAAATTCTCTGAAGCAAATAAACTTGGCGAGGGAGGATTTGGACCTGTTTACAAGGGAAAACTTACAAATGGATATGAGATTGCAGCGAAAAGGCTTTCAAGATGTTCAGTACAGGGACTGGAGGAATTCAGAAATGAGACCAAACTCATTGCCAAACTGCAGCACAGGAATTTGGTAAGACTTCTAGGCTGTTGCATTCAACTAGGTGAGAAGATTCTGATTTATGAGTACATGCCCAATGGAAGCCTGGATTCCTTCTTGTTTGATGCCACGAAACGACAGGAACTAGACTGGGGTACACGTATTGGCATTATTGAAGGGATTGCACAAGGACTTCTTTACCTGCACCAACATTCAAGGTTAAGAATTATCCACAGGGATTTAAAGCCCAGTAATATTCTATTAGACAGCGAAATGAACCCGAAAATATCGGATTTCGGCTTGGCTCGAATATTTGGAGGCAGTGAGATGCAAGCAAACACTGGCCGCATTGTTGGAACATATGGTTACATGCCACCAGAATATGCCATATGGGGTATTTTCTCGATAAAATCAGATGTGTTCAGCTTTGGGGTACTTCTTCTTGAGATTGTCAGTGGCAAGAAGAATAGGAGTGTCTACAAGGAATTGTCTCTTAATCTTCTTGGATATGCTTGGGAATTGTGGACATCGGATCGTGGTATGGACTTGTTAGATCCTACGTTGGAATGTCCTCCTTCTTGGAATCATGCAGTGCCTCTGAGATACATAAACATAGGACTTCTGTGTGTCCAGGAGATACCGTCGGATAGACCAACAATGGTTGACATTGTATCCATGCTTGCGAGTGAGCATGAACCTCTGCCTAATCCCAAGCAACCTGCTTTTACAATAGGTCGACATGAGAGCAAAACGAGCGCAGCGTCGTCAAGCAGCTTCGTACCGAGTGATGCTTCGCTGAATTATATGACGCAATCGAACGTGAGTGGTAGATGA 2547 0.4174 MSVSKSSLFLVRVLLVLMQSYEPILSKAGDTISAGQFLLGNQTIVSERNTFQLGFFKPGNYNMYLGISYKDHPGKKNDVWVANRNTPLSNQPSLRYGLSLDGNLVITQGSSVLKLVWSTNLTHSSLNSTEAILFDSGNLVLRDKLNHSRIFWESFDHPIDVWLPGQKLRISKVSDRLLTSWKNQQDPTSGIFSLGIDRSNASSSIELYLQWNKSLNYWRSGVWNGQYFKNARDMKASDVYNFTYISTENESYLTYGVSNLDTLTKIYLGHRGQLQLHVWLDEHWNWKSLWQEPRSSSVYALCGAFGLFHEYDSELCECLQGFSPSSKETRLNDWSNGCVRRYPLNCNISDHEAKDWFFRLQNVTLPANEKYFSAFNNASCEIACMRNCSCTAFVHNSSGCLIWDGVLLNLQQFSDGTNRLQDIYLKLSAAEIQHTHGAKDNSNRKRVLETILPVCIGALLLILSLCLVFIKVLKVKGESNEDLLSFDFNSNPQIADDEHDNQSQRKQDVELPAFSYKSVCATTDKFSEANKLGEGGFGPVYKGKLTNGYEIAAKRLSRCSVQGLEEFRNETKLIAKLQHRNLVRLLGCCIQLGEKILIYEYMPNGSLDSFLFDATKRQELDWGTRIGIIEGIAQGLLYLHQHSRLRIIHRDLKPSNILLDSEMNPKISDFGLARIFGGSEMQANTGRIVGTYGYMPPEYAIWGIFSIKSDVFSFGVLLLEIVSGKKNRSVYKELSLNLLGYAWELWTSDRGMDLLDPTLECPPSWNHAVPLRYINIGLLCVQEIPSDRPTMVDIVSMLASEHEPLPNPKQPAFTIGRHESKTSAASSSSFVPSDASLNYMTQSNVSGR* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00473 848 MobiDBLite consensus disorder prediction 816 834 - -
Pte10g00473 848 PIRSF SRK 1 848 IPR024171 GO:0004674
Pte10g00473 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Pte10g00473 848 SMART blect_4 35 158 IPR001480 -
Pte10g00473 848 MobiDBLite consensus disorder prediction 802 834 - -
Pte10g00473 848 Gene3D - 24 155 IPR036426 -
Pte10g00473 848 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 602 806 - -
Pte10g00473 848 ProSiteProfiles Bulb-type lectin domain profile. 29 154 IPR001480 -
Pte10g00473 848 SMART ntp_6 352 427 IPR003609 -
Pte10g00473 848 FunFam Uncharacterized protein 501 601 - -
Pte10g00473 848 Pfam S-locus glycoprotein domain 218 325 IPR000858 GO:0048544
Pte10g00473 848 Pfam D-mannose binding lectin 79 182 IPR001480 -
Pte10g00473 848 ProSiteProfiles PAN/Apple domain profile. 346 428 IPR003609 -
Pte10g00473 848 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 187 IPR036426 -
Pte10g00473 848 CDD STKc_IRAK 532 798 - -
Pte10g00473 848 CDD B_lectin 36 158 IPR001480 -
Pte10g00473 848 SUPERFAMILY Protein kinase-like (PK-like) 502 798 IPR011009 -
Pte10g00473 848 ProSiteProfiles Protein kinase domain profile. 526 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00473 848 Gene3D Transferase(Phosphotransferase) domain 1 602 809 - -
Pte10g00473 848 Pfam Protein tyrosine and serine/threonine kinase 529 798 IPR001245 GO:0004672|GO:0006468
Pte10g00473 848 Gene3D Phosphorylase Kinase; domain 1 489 601 - -
Pte10g00473 848 Pfam PAN-like domain 351 409 IPR003609 -
Pte10g00473 848 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 20 789 - -
Pte10g00473 848 CDD PAN_AP_plant 343 428 - -
Pte10g00473 848 SMART serkin_6 526 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00473 Pte-Chr10 4213521 4216833 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00473 447 815 Receptor kinase-like Gene Family AT4G23230 52.688 3.00e-117 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte10g00473 PK_Tyr_Ser-Thr 9.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00473 - - qsu:112006795 882.478