Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00469 ATGGAAAGGAATGATGGAGGCGGCGGATTCGGAGATTGGACTGATAGAGCGAATTATCATTACGGAAATGGGTTCTTGAGAATTGGTGAGTCAAAGCCCAGACTCAGGTGGACAGCTTATCTCCACGATCTGTTTGTGAATGCTGTGACCAAACTTGGTGGTCCAGACAGAGCAACTCCTACAGCTTTGTTGAGGTTGATGGGCGTGAAAGGCCTGACTTTGTATCATTTGAAGAGCCATTTACAGAAGTATAGACTTACTAAGCAAACACGGAAATTCAATAATTCAGAACAGAACAAAAAGAACAGAAGTGGGGTGACCAGCAATTCAGGAGACCACAGGGAATGGGGGAATATCCCAGATCAAACAAGCTTTCATGAACAACTTGAGAGGAAAGTAAAAAAGATATTGGAAGCTCAAGATATGTATTTGCAACTTATGTTAGAGGAAGACCGAAATGCCGTCCCCCAGCATGTAAATGGGACTGGCATCGTAGAATCAGCAAAAGCTCAATTACCAGATTCCGGTGCAAATTGGTTGAATCTAATGGAGGATCTGAATAGAAATGGCAAAGAGAATGTACTGCGCATGAGTGATGTTTATAAGAAGACAAAGCCGATTTACCAAGAGAAAGAGAGGATAGATAAAAATGTTAAGGTAGAAGTAGAAGAAGGCTCAACAATATTTGACTTGAACATAAATGATAGCTACCGCCCATTTTCTGAACGTCCAACAAAAATGGACCTCAAGTTGATAGTATAG 762 0.4134 MERNDGGGGFGDWTDRANYHYGNGFLRIGESKPRLRWTAYLHDLFVNAVTKLGGPDRATPTALLRLMGVKGLTLYHLKSHLQKYRLTKQTRKFNNSEQNKKNRSGVTSNSGDHREWGNIPDQTSFHEQLERKVKKILEAQDMYLQLMLEEDRNAVPQHVNGTGIVESAKAQLPDSGANWLNLMEDLNRNGKENVLRMSDVYKKTKPIYQEKERIDKNVKVEVEEGSTIFDLNINDSYRPFSERPTKMDLKLIV* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00469 253 MobiDBLite consensus disorder prediction 89 120 - -
Pte10g00469 253 NCBIfam myb-like DNA-binding domain, SHAQKYF class 32 87 IPR006447 GO:0003677
Pte10g00469 253 SUPERFAMILY Homeodomain-like 31 88 IPR009057 -
Pte10g00469 253 Gene3D - 31 90 - -
Pte10g00469 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 89 IPR017930 -
Pte10g00469 253 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 30 181 IPR044848 GO:0003700
Pte10g00469 253 FunFam Two-component response regulator 29 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00469 Pte-Chr10 4167223 4169980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00469 8 174 G2-like Transcription Factor Family AT4G13640 38.542 6.93e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte10g00469 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00469 - - qsu:112001513 202.601