Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00460 ATGGGAGAAGAAGTTGAGGCGGCAAAACAGGAAGCTCTGACACTCAAGTCCCTCGCAGAAACCAAATATAAAGAATCCAAATTCAAGTCAGCACTCAAATACGCAAAACGAGCTCAAAGTCTCTCACCAGACCTCGATGGTATATCTGAGATGGTCACCTCTTTCAAAATCCTTCGTGTTGGCTCCAGGTCATCCACTACCCCTGACTGGTACAAAATTCTTCAAATCGAGCCTTTTGCTCATGTCAACACTATTAAAAAGCAGTACAAAATTTTGGCTTTGATTCTTCATCCTGATAAGAATCAATATGTGGGTTCTGAAGAAGCTTTCAAGCTTGTAGGTGAAGCCTTTAGGTTTTTGTCTGATAAGGTTAGGAGGAAAGAGTATGATATGAAACTAAGGATTCGGATGCAAAAGGAGGCTACTGCTGTTTTGAAGGATGTTGAGACGTTTTGGACTGCGTGTTCTACTTGTAGGTTGTTGCATAAGTTTGAGAAGAAGTATTTGGGACATCATTTGGTGTGTCCTATTTGTAAGAAGAGTTTTAAGGCTGTGGAGGTTGAGGATAATGAGTCTGACGGGGAAGGAACTGGTGTTAGAGATATGAGTGTGAGATTAAATGTGGATTTGCAGCATAATGTGGATGAGGGTTCCAAAGGGAAAGTAGGTAGTGATGAAAGATTGCTAAGTTTAAAGGGGAAAAGGAGGAGTGGGAGAGAAATCGGGAATGAGAATCATGCAAATTCGAGAGGGAAATCTGCTAGTGATGGTGATAATGTGAGGAATAGGTATTCTGATGGAGTGGTTGGTAATACTGAGTGGAATGGAGGGAGGTTGAGAAGCAGGGTTGGGAAAAGAAGAATGAGTACTGTTGATGACTTATTGGAAAGGTCAGAACCAAAGAGACACAAGACTGGAGAGGCAATGATGACTTTAGCTGAAATGCAGGCTGAAGCGAAGCGAAAGGTTCAGGATCACAGGATGA 985 0.4213 MGEEVEAAKQEALTLKSLAETKYKESKFKSALKYAKRAQSLSPDLDGISEMVTSFKILRVGSRSSTTPDWYKILQIEPFAHVNTIKKQYKILALILHPDKNQYVGSEEAFKLVGEAFRFLSDKVRRKEYDMKLRIRMQKEATAVLKDVETFWTACSTCRLLHKFEKKYLGHHLVCPICKKSFKAVEVEDNESDGEGTGVRDMSVRLNVDLQHNVDEGSKGKVGSDERLLSLKGKRRSGREIGNENHANSRGKSASDGDNVRNRYSDGVVGNTEWNGGRLRSRVGKRRMSTVDDLLERSEPKRHKTGEAMMTLAEMQAEAKRKVQDHRM 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00460 328 SMART dnaj_3 68 125 IPR001623 -
Pte10g00460 328 Pfam DnaJ domain 69 130 IPR001623 -
Pte10g00460 328 CDD DnaJ 69 122 IPR001623 -
Pte10g00460 328 MobiDBLite consensus disorder prediction 210 290 - -
Pte10g00460 328 MobiDBLite consensus disorder prediction 247 269 - -
Pte10g00460 328 Gene3D DnaJ domain 54 157 IPR036869 -
Pte10g00460 328 MobiDBLite consensus disorder prediction 212 246 - -
Pte10g00460 328 PRINTS DnaJ domain signature 89 104 IPR001623 -
Pte10g00460 328 PRINTS DnaJ domain signature 105 125 IPR001623 -
Pte10g00460 328 PRINTS DnaJ domain signature 71 89 IPR001623 -
Pte10g00460 328 PANTHER BNAC03G44070D PROTEIN 7 301 - -
Pte10g00460 328 SUPERFAMILY Chaperone J-domain 62 134 IPR036869 -
Pte10g00460 328 ProSiteProfiles dnaJ domain profile. 69 133 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00460 Pte-Chr10 4010722 4011925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00460 9 188 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.122 2.62e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00460 - - cave:132175116 379.407