Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00452 ATGTATATGGAGCTATTCCCAGCACAACCAGATTTGTCTCTTCAGATAAGCCCACCAAATAGCAAGGCCACATCTAGTTGGAGAAGAAGTGTTACAGCAGATGATGTGGGTTTGGGGTTCTGGAAGAGAACTCTGGACTCCAGAACCATGTCTGCAATGGCCAAAACTGACAGCTCGTTTGACCTCTCAATCTCCAATCCAATAGCTTCGAATCACCTTACTACCTCCAACAACCACATCAATGTTCACCACTTCCAAAACGTTAGTCGCAACCCCCTCCAATCAGTACCATTACAACAAAACCACTACGCTCAGTTTCGCCATCATCAGTCACAGCTGATGCAGCAGCTCCAGCCACAACAAGTACATCACGACCATGGTGGGCTAAGCCAAGAGCTGGGTTTTCTGAGACCCATTAGAGGGATTCCCGTCTACCAAAACTTTCCTCCTTTTCCATTTGTTCAACAACCGTCCTTAGATGCTTCCACACTGTCTTCTGTAGATAAGAACTGCACTATAAACCCTAGTACAACTGGTTCAAGGCCTTTCCCCTCTCGTTGCCTGATGAAGTCGAGATTTCTTTCATGTTTCCCTGCTAAACGTAGCGTGAGAGCCCCTCGGATGCGTTGGACTACTACCCTCCATGCTCGGTTTGTTCATGCCGTTGAGCTTTTGGGAGGCCATGAAAGGGCTACTCCCAAATCAGTCCTTGAACTCATGGATGTCAAAGATCTCACTTTGGCTCATGTTAAATCCCATTTGCAGATGTACCGGACACTGAAGACAACCGATAGAGCAGCTGAAGCTCCTTGCGGCCAACAGAATCTCTGTGATAATGGTTCATCCGGAGATAATTCAGAAGACTTATTCATGTCTGTTGTTCACAACTCAAGAAGAGATGAGCTGTTCGTTCAGGAAAATAGAACTAGTTTTACTCAAGATAAGGATTGTCAAGGCCTTTGGAGCAATTCTTCGAGGGAAGTTTGGTTGCATGGTAAGACAAAGGATTCTGCTGCAAACATGCAAACCCATGAGAAAGACAAGGATCCAAAGTGTGTAAGTCATCATAAAGGTTCGGAAGGGAGCTCATCCACGAGCGATTCGGGAACAAGCTCCAAGAGACCTAACTTGGACTTGGAGTTCACTCTGGGGAGGTCACACTGA 1164 0.4631 MYMELFPAQPDLSLQISPPNSKATSSWRRSVTADDVGLGFWKRTLDSRTMSAMAKTDSSFDLSISNPIASNHLTTSNNHINVHHFQNVSRNPLQSVPLQQNHYAQFRHHQSQLMQQLQPQQVHHDHGGLSQELGFLRPIRGIPVYQNFPPFPFVQQPSLDASTLSSVDKNCTINPSTTGSRPFPSRCLMKSRFLSCFPAKRSVRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTLKTTDRAAEAPCGQQNLCDNGSSGDNSEDLFMSVVHNSRRDELFVQENRTSFTQDKDCQGLWSNSSREVWLHGKTKDSAANMQTHEKDKDPKCVSHHKGSEGSSSTSDSGTSSKRPNLDLEFTLGRSH* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00452 387 MobiDBLite consensus disorder prediction 357 377 - -
Pte10g00452 387 Gene3D - 205 262 - -
Pte10g00452 387 Pfam Myb-like DNA-binding domain 207 258 IPR001005 -
Pte10g00452 387 MobiDBLite consensus disorder prediction 336 387 - -
Pte10g00452 387 MobiDBLite consensus disorder prediction 336 356 - -
Pte10g00452 387 NCBIfam myb-like DNA-binding domain, SHAQKYF class 206 259 IPR006447 GO:0003677
Pte10g00452 387 SUPERFAMILY Homeodomain-like 203 260 IPR009057 -
Pte10g00452 387 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 10 386 IPR044847 GO:0000976|GO:0006355|GO:0010158
Pte10g00452 387 FunFam Myb family transcription factor 204 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00452 Pte-Chr10 3934818 3939040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00452 137 385 G2-like Transcription Factor Family AT5G16560 40.532 9.70e-53 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte10g00452 Myb_DNA-binding 1.9e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00452 - - qsa:O6P43_025117 427.557