Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00445 ATGTCGGTTGATTTGCTTCCCAACAGTGAACTTCTCTGCAGTGAAGAATCTTCAGGAATATTGTCCGGAGTGTCGTCGCTAGAATGTTCATCCGATATCGACTCTTGCTTTTCAACAGAGGAATCCATTGCAGGAATCCTTAAACATGAGCAGAAATTTGTGCCAGGATTTGACTACCTCTCGAGGTTTGAATGCCAGTCTCTTGACGCCGCCGCTAGAGATGAATCGGTTGCATGGATCCTGAAGGTGCGTGCTTATCATGGTTTCCATCCATTAACGGCGTATCTGTCAGTCAACTACATGGATCGTTTTCTGTACTCCCGACGGTTGCCGAAAACAAATGGGTGGCCAATGCAACTCCTAGCTGTTTCTTGTTTGTCTTTAGCTGCTAAGATGGAGGAACCTCTGGTTCCTTCTCTCCTTGACCTTCAGGTGGAAGGTGCTAAATATATATTTGAACCAAGAACAATTAGTAGGATGGAACTGCTAGTTCTTGGTGCACTTGATTGGAGACTGCGATCTGTAACCCCATTCAGCTTTCTTGATTTCTTTGCATGCAAACTCGATTCTGCAGGAACTTTTGCTGGGTTTCTTGTTTCACGGGCTACAGAAATATTGTTTACCAACATACAAGAGGCTAGTTTTCTTGCGTACCGGCCATCATGCATTGCTGCTGCGGCAATACTCTGTGCTGCTAATGAAATTCCTAATTTGTCTCTAGATAATCCTGAGGACGCTGAGTCATGGTGTGATGGACTAAGAAAAGAGAAAATTATAAGCTGCTATCAATTGATGCAAGACCTAGTCATGGAGAATAGACGAAGGAAGAACACGAATAATGCGTTACCACAGCTCCGGGTGACATTTCGTTCAATTATGAGGTCAAGTGACTATTTACTATCCTCGTCGTCTTCAACGTCATCGTCCTCGTCATATAAAAGGAGGAAACTCAATTACTACGATGACAAAGAAAACTCCGATTGA 984 0.436 MSVDLLPNSELLCSEESSGILSGVSSLECSSDIDSCFSTEESIAGILKHEQKFVPGFDYLSRFECQSLDAAARDESVAWILKVRAYHGFHPLTAYLSVNYMDRFLYSRRLPKTNGWPMQLLAVSCLSLAAKMEEPLVPSLLDLQVEGAKYIFEPRTISRMELLVLGALDWRLRSVTPFSFLDFFACKLDSAGTFAGFLVSRATEILFTNIQEASFLAYRPSCIAAAAILCAANEIPNLSLDNPEDAESWCDGLRKEKIISCYQLMQDLVMENRRRKNTNNALPQLRVTFRSIMRSSDYLLSSSSSTSSSSSYKRRKLNYYDDKENSD* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00445 327 MobiDBLite consensus disorder prediction 300 327 - -
Pte10g00445 327 CDD CYCLIN_AtCycD-like_rpt2 175 265 - -
Pte10g00445 327 SMART cyclin_7 78 166 IPR013763 -
Pte10g00445 327 SUPERFAMILY Cyclin-like 157 276 IPR036915 -
Pte10g00445 327 MobiDBLite consensus disorder prediction 300 314 - -
Pte10g00445 327 SUPERFAMILY Cyclin-like 39 172 IPR036915 -
Pte10g00445 327 SMART Cyclin_C_2 175 307 IPR004367 -
Pte10g00445 327 Gene3D - 56 173 - -
Pte10g00445 327 PANTHER CYCLINS 30 272 IPR039361 -
Pte10g00445 327 Gene3D - 46 262 - -
Pte10g00445 327 Pfam Cyclin, C-terminal domain 175 277 IPR004367 -
Pte10g00445 327 FunFam D2/4-type cyclin 56 173 - -
Pte10g00445 327 Pfam Cyclin, N-terminal domain 47 172 IPR006671 -
Pte10g00445 327 CDD CYCLIN_AtCycD-like_rpt1 72 170 - -
Pte10g00445 327 ProSitePatterns Cyclins signature. 73 104 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00445 Pte-Chr10 3840391 3843484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00445 1 291 Core Cell Cycle Gene Families AT1G70210 62.585 5.36e-127 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00445 K18810 - qsa:O6P43_025341 439.884