Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00432 ATGGCTCCTGCAAATAATAATTGGCTGTCCTTCTCTTTGTCTCCCATGGAAATGCTGAGGTCCTCCGACTCCCAGTTTGTTACCTATGACCCGAGTTCTTCAGCTCCTTTAACTCATTACTTTGTTGATAGCTTCTACTCAAATGAACAAGACAACGAAGGCAAAGTAGGTCAAGCCCAAAACATGGCAGACTCCTCGATTTTCACAAGCTATATCGACTCACACAGCCATCACCATCCAGTACCAAAGCTAGAGGACTTTCTGGGTGATTCTTCGTCCCTTGTAAGATATTCTGATAGCCAAACAGAAACACAGGATTCATCACTGACCCAGTTATATGACCATGGCTCCGCCTACTTCAACGACCAACAAGATCTGAAAGTCATGACTGCCTTCCAAGCTTTCTCCACCAACTCGGGTTCTGAAGTGGATGACTCGTCCTCAATCGGCAGAAATCAGCTCACCGGTGGTGGTGAGTTTACCGGTCATTCTATTGATCAGCCATCTGGGAATGAGTTGGGTTTTCCCAGTCGTGGTACTGGTGCTTTGTCTCTTGCTGTATCTCAGAGTTCTGAGAAGGCCATTGTCCCGGTCGATTCTGATAGCAAAAAGAAGATTGCTGACACTTTTGGCCAGCGAACATCGATTTACAGAGGAGTCACTAGGCACAGATGGACTGGTAGGTATGAAGCGCATCTGTGGGATAACAGTTGTAGAAGAGAGGGTCAAGCTAGAAAAGGCCGTCAAGGTGGCTATGACAAAGAAGATAAGGCTGCAAGAGCTTATGATTTAGCTGCTCTAAAATATTGGGGACCGTCTGCTACCACTAACTTTCCTATTTCCAATTACACAAAGGAACTGGAAGAAATGAAACTAGTGTCCAAGCAAGAATTTATAGCTTCATTGAGACGGAAGAGCAGTGGCTTCTCCCGTGGTGCTTCTATATACAGGGGTGTCACAAGACATCATCAGCAGGGTCGATGGCAAGCACGAATTGGTCGAGTTGCTGGCAACAAAGATCTTTACCTTGGAACTTTTGCCACTGAGGAGGAAGCAGCAGAGGCGTATGACATTGCAGCCATCAAGTTCAGAGGATCGAACGCTGTTACAAACTTTGAGATGAGTAGATATGATGTGGATGCTATTCAAAGCAGTGCTCTTCCCATTGGTGGTGCAGCAAAACGTCTCAAGATTTCATTAGAGTCGGAACAGAAACCTGCCATCCACAGTCAGCAACTTCAGTGCTCCTCCTTAGTCAGTAACATCCATTTCTCCGGTGTTCAAGGGTTACATCAACCTCTTCCTTGTGGAATTCCATTTGACTCTGCAGCTGCTTATTATCATCCTAGCCTGTTCCAACACCTTCAGGTTAACCATGTTGGTGATGCGGATCCCTCTGGTACAACTACAGCCATATCTGCTCCTCCATTGACTACTGCAATGCCACCTGCTGAGTTTTTTCTGTGGCCCCATCAGTCATATTAA 1485 0.4599 MAPANNNWLSFSLSPMEMLRSSDSQFVTYDPSSSAPLTHYFVDSFYSNEQDNEGKVGQAQNMADSSIFTSYIDSHSHHHPVPKLEDFLGDSSSLVRYSDSQTETQDSSLTQLYDHGSAYFNDQQDLKVMTAFQAFSTNSGSEVDDSSSIGRNQLTGGGEFTGHSIDQPSGNELGFPSRGTGALSLAVSQSSEKAIVPVDSDSKKKIADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQGGYDKEDKAARAYDLAALKYWGPSATTNFPISNYTKELEEMKLVSKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGSNAVTNFEMSRYDVDAIQSSALPIGGAAKRLKISLESEQKPAIHSQQLQCSSLVSNIHFSGVQGLHQPLPCGIPFDSAAAYYHPSLFQHLQVNHVGDADPSGTTTAISAPPLTTAMPPAEFFLWPHQSY* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00432 494 Gene3D AP2/ERF domain 315 375 IPR036955 GO:0003700|GO:0006355
Pte10g00432 494 Gene3D AP2/ERF domain 216 281 IPR036955 GO:0003700|GO:0006355
Pte10g00432 494 ProSiteProfiles AP2/ERF domain profile. 216 279 IPR001471 GO:0003700|GO:0006355
Pte10g00432 494 MobiDBLite consensus disorder prediction 140 177 - -
Pte10g00432 494 SUPERFAMILY DNA-binding domain 215 281 IPR016177 GO:0003677
Pte10g00432 494 SMART rav1_2 216 285 IPR001471 GO:0003700|GO:0006355
Pte10g00432 494 SMART rav1_2 315 379 IPR001471 GO:0003700|GO:0006355
Pte10g00432 494 PRINTS Ethylene responsive element binding protein signature 217 228 IPR001471 GO:0003700|GO:0006355
Pte10g00432 494 PRINTS Ethylene responsive element binding protein signature 355 375 IPR001471 GO:0003700|GO:0006355
Pte10g00432 494 FunFam AP2-like ethylene-responsive transcription factor ANT 215 281 - -
Pte10g00432 494 SUPERFAMILY DNA-binding domain 314 375 IPR016177 GO:0003677
Pte10g00432 494 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 75 407 - -
Pte10g00432 494 CDD AP2 314 375 IPR001471 GO:0003700|GO:0006355
Pte10g00432 494 ProSiteProfiles AP2/ERF domain profile. 315 373 IPR001471 GO:0003700|GO:0006355
Pte10g00432 494 CDD AP2 215 281 IPR001471 GO:0003700|GO:0006355
Pte10g00432 494 Pfam AP2 domain 315 365 IPR001471 GO:0003700|GO:0006355
Pte10g00432 494 Pfam AP2 domain 216 271 IPR001471 GO:0003700|GO:0006355
Pte10g00432 494 MobiDBLite consensus disorder prediction 140 174 - -
Pte10g00432 494 FunFam AP2-like ethylene-responsive transcription factor 314 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00432 Pte-Chr10 3746818 3751086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00432 64 495 AP2-EREBP Transcription Factor Family AT5G10510 60.039 1.02e-176 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pte10g00432 AP2 1.1e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00432 K09285 - qsa:O6P43_025207 716.457