Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00431 ATGGGGGTGTTGAACTCAACGGAACCTACTAACTTTTTGGGTGTAAACCTCACCATGTCTGAGGAAGAGGCCAGAGGAGGTGGACAGATAATGGACAAGACAGAAATGCGGTCTCTGGTTGATCAGAGAAGAGAGTTTGTGTGGAAGGATGAGTCTTCACCACAAGATGATGCTTCCCCAAGATGTGTACTGGAAATCCCAATATCAGGTACAGACTTTGAAAACAGTGGTAGCAGCATGATCAGCTCTGCAACACCTGAGAAATCGTCCAGTCAAAGTGCACAATGGAAGACTGCTCTTGATGTCTTTAAAAAAAAGTCCCTGAGAACATTTGCAACGATACCTTTGCTGGCTGCCAGCTATGAGATTTCCAAGAAGAATTTGAGGAGGAAATTACCTCAAATTACAAGTGCTGAAGAAGGCATTGATCTTGGAGATATTCCTATCACAAAGACCTCGTGGAGGAACTTCTTTCATGCAGAGCTTGCAGCTGCGACCAACAATTTTAGTCCAGAGAACATGATTGGGAAAGGAGGCAATGCTGAAGTTTACAGAGGATTCTTGTCGGATGGTCAAGTGGTAGCGATAAAGAGGTTGATGTTGATAGATAAGGAAGAAGCAGACAGAACCAGTGACTTCCTGTCAGAGCTTGGGATTATTGCACATATTAATCATCCCCGTGCAGCAAGATTGATTGGTTATGGAGTGGAGGGTGGATTGCACCTTGTACTTCAATATTCACCTCACGGCAGCCTTGCCTCTCTGCTTTTTGGTCAAGAAGGGTGCCTTGAATGGAAGGTACGGTTCAAAGTTGCTGTTGGGGTAGCAGAAGGATTGCGGTATCTCCATCATGAATGCCATAGGCGCATCATTCACAGAGATATCAAAGCTTCTAACATATTGCTAACTGAAGATTTCGAAGCTGAGATTTCTGATTTCGGATTGGCGAAGTGGCTTCCAGAAAATTGGGCTCACCATATTGTATTTCCCATTGAAGGCACATTTGGGTATTTGGCTCCTGAATATTTCATGCATGGAATCGTTGACGAGAAGACAGATGTTTTCGCATATGGAGTTTTACTATTGGAGCTCATAACGGGTCGTCGTGCAGTAGATTCAAGCAGACAAAGTCTTGTGATTTGGGCAAAACCATTGATTGATTCACATAATGTAAAGGAACTGGTGGATCCTCGATTGGATGATGCCTTTGACCCCAATGAAATGAACCGGGCAATACTGACTGCTTCCATGTGCGTGGATCACAAATCCTCAGAGCGGCCCTCTATGGCCCGGGTTGTGCAGATGTTGAATGGTGTGGATGGACCTGTAATAGAACTGAAACAAAAATCACTGTCGCCAAAATCCCTATTGCTAGAAGCCTGTGATCTGGAAGGCTACACTTGTTCTAATTACTTGAGCGACCTCCATCGTCATAGGCAATTAGTGATGGAGTGA 1455 0.4447 MGVLNSTEPTNFLGVNLTMSEEEARGGGQIMDKTEMRSLVDQRREFVWKDESSPQDDASPRCVLEIPISGTDFENSGSSMISSATPEKSSSQSAQWKTALDVFKKKSLRTFATIPLLAASYEISKKNLRRKLPQITSAEEGIDLGDIPITKTSWRNFFHAELAAATNNFSPENMIGKGGNAEVYRGFLSDGQVVAIKRLMLIDKEEADRTSDFLSELGIIAHINHPRAARLIGYGVEGGLHLVLQYSPHGSLASLLFGQEGCLEWKVRFKVAVGVAEGLRYLHHECHRRIIHRDIKASNILLTEDFEAEISDFGLAKWLPENWAHHIVFPIEGTFGYLAPEYFMHGIVDEKTDVFAYGVLLLELITGRRAVDSSRQSLVIWAKPLIDSHNVKELVDPRLDDAFDPNEMNRAILTASMCVDHKSSERPSMARVVQMLNGVDGPVIELKQKSLSPKSLLLEACDLEGYTCSNYLSDLHRHRQLVME* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00431 484 Gene3D Phosphorylase Kinase; domain 1 134 246 - -
Pte10g00431 484 Pfam Protein kinase domain 172 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00431 484 Gene3D Transferase(Phosphotransferase) domain 1 248 449 - -
Pte10g00431 484 SUPERFAMILY Protein kinase-like (PK-like) 145 436 IPR011009 -
Pte10g00431 484 PANTHER OS08G0249100 PROTEIN 40 451 IPR046958 -
Pte10g00431 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 290 302 IPR008271 GO:0004672|GO:0006468
Pte10g00431 484 ProSiteProfiles Protein kinase domain profile. 169 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00431 484 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 145 246 - -
Pte10g00431 484 ProSitePatterns Protein kinases ATP-binding region signature. 175 197 IPR017441 GO:0005524
Pte10g00431 484 SMART serkin_6 169 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00431 484 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 248 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00431 Pte-Chr10 3742247 3745924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00431 151 440 Trihelix Transcription Factor Family AT5G38560 44.518 9.15e-72 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pte10g00431 Pkinase 8.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00431 - - qsa:O6P43_033250 654.055