Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00393 ATGGTTTCAAGGTCTTATGGTAACTTGTTGGAGCTTACTTCCTGTGAATCACCATCTTTTGGCCGCGAGAGGAAAAGGTTTCCTCGAGTAGCAACTTTTGCTGGAGTCTTGTCTGAAGTAGATGATGAAAATTGCAACAGCGTAGGTTCAGATGCTCATTCATCTGTCTCCCAAGATAGGATGATAATTGTAGGAAACCAGCTACCGATTCGGGCTTATAGGAAAGATAATGGTGCTTGGGGTTTTGATTGGGACGAAGATTCACTCCTTTTACAGCTGAAAGATGGACTTGGAGAAGATGTAGAAGTAACATATATTGGCTGTCTCAAGGAAGAGATTGACCTGAGCGAGCAAGATGATGTTGCACAGTATTTGCTTGACAATTTCAGATGTGTTCCAACGTTTCTCCCTCCTGACCTTTTCACCAAATACTATCATGGATTCTGTAAGCAACATTTATGGCCTTTGTTTCACTACATGCTTCCTCTATCACCAGATCTCGGTGGTCGGTTTGACAGGTCCCTTTGGCAAGCTTATGTCTCTGTGAACAAGATATTTGCAGATAAAGTTATGGAAGTAATTAGTCCAGATGATGACTTTGTGTGGGTTCATGATTATCATTTGATGGTACTACCGACATTTTTGAGAAAGAGGTTTAACAGAGTGAAGCTTGGATTCTTCCTCCATAGTCCATTCCCATCATCTGAAATATACCGAACACTTCCTGTCAGGGACGAACTGCTCAGGGCACTTCTGAATTCTGACCTTGTTGGATTTCATACTTTTGATTATGCAAGGCACTTCCTCTCATGTTGTAGCAGAATGCTAGGCCTATCTTACCAATCTAAGCGGGGTTATATCGGTCTTGAGTACTATGGTCGCACCGTTAGCATCAAGATTTTGCCAGTTGGCATACACATAGGCCAACTCCAATCTGTCCTTAATCTTCCTGAAACGGAATCTAAGGTTGCAGAACTAAGGGAACAGTTTAAAGGTCAGATTGTGTTGCTTGGGGTGGATGATATGGATATCTTCAAAGGAATTAGCTTGAAACTTTTGGCTATGGAGCAATTACTCATACAACACCCTGATATAAGGGGCAGAGTTGTTCTCATTCAAATTGCGAATCCAGCAAGGGGCAAGGGAAAGGATGTAGAGGAGGTCCAATCTGAAACTTCCACAACAGTTAAAAGGGTAAATGATAGGTTTGGAAGGCCAGGTTACAGCCCTGTGGTCTTGGTGGATACCCCACTTCAGTTTTACGAGAGAATTTCTTATTATGTAATTGCAGAATGTTGCCTTGTTACAGCGGTCAGGGATGGAATGAATCTTATACCTTATGAATATGTCATATGTCGTCAAGGGAATGAAAAGCTGGACGAGACCCTTGGAATAAGCTCCTCTTCACCGAAGAAGAGCATGCTGGTGGTGTCTGAGTTCATTGGTTGCTCGCCTTCCCTCAGTGGGGCAATTCGAGTCAATCCCTGGAATGTTGATGCTGTTGCTGAAGCTATGGAATATGCTCTGATGGCCCCAGAGTCAGAGAAACAGCTTCGGCATGAGAAGCACTATAGGTATGTTAGTACACATGATGTTGCATACTGGGCTCGTAGTTTCTTGCAGGATCTTGAAAGGGCCTGTAAGGACCATGTGAGAAGGAGATGCTGGGGTATCGGTTTTGGTTTAGGGTTTCGAGTGATAGCTTTAGATCCTAATTTCAGAAAGCTCTCGGTGGAACACATTGTTTCAGCTTACAAGAGGACCAAGAACAGAGCAATTCTCTTGGATTACGATGGCACCATGATGCTACCTGGCTCAATTAGTACAAATCCCAAGGCAGAGGCAGTTGGAATCTTGAACAGCTTGTGCAAAGACTTGAAGAATGTAGTTTTCGTTGTTAGTGGGAAAGATAGAACAACTATAACTGATTGGTTTTCTCCATGTGAAAATCTTGGGATTGCAGCAGAAAATGGCTATTTTGTGAGAACGAATCAAAATGCAGATTGGGAAACTTGTGTGTCTGTGCCGGACTTTGAGTGGAAACAGATTGCCCTTCCTGTAATGCAGTTATACACTGATACAACCGATGGTTCCACCATTGAGACCAAAGAGAGTGCTCTCATTTGGAATTATCAGTTTGCAGACCGGGATTTCGGTTCTTGCCAAGCTAAGGAGCTTCTGGATCATCTGGAAAGTGTTCTTGCAAATGAGCCAGTTTCTGTGAAAAGTGGTCCACATTATGTAGAAGTGAAACCTCAGGGTGTCAACAAAGGTCTTGTAGCAGAATTTCTTCTATCGACAATGCAGCGGAGGGGAGTGCTTGCAGACTTTGTTCTCTGCATTGGAGATGACAGGTCAGATGAGGACATGTTTGAGATGATAATAAGTGCAAAGGACTCTCTCTCTCTTTCACCTGTAGCTGAAGTGTTCGCATGCACTGTGGGGCAGAAACCAAGCAAAGCCAAATATTACCTGGAAGACATGACAGAGATCTTGAGGATGTTGCAGGGTCTAGCCAATGCGTCTGATAATGCTTGCAGATGTTCTTCCCAAGCTGCTCACTGA 2565 0.4347 MVSRSYGNLLELTSCESPSFGRERKRFPRVATFAGVLSEVDDENCNSVGSDAHSSVSQDRMIIVGNQLPIRAYRKDNGAWGFDWDEDSLLLQLKDGLGEDVEVTYIGCLKEEIDLSEQDDVAQYLLDNFRCVPTFLPPDLFTKYYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLVGFHTFDYARHFLSCCSRMLGLSYQSKRGYIGLEYYGRTVSIKILPVGIHIGQLQSVLNLPETESKVAELREQFKGQIVLLGVDDMDIFKGISLKLLAMEQLLIQHPDIRGRVVLIQIANPARGKGKDVEEVQSETSTTVKRVNDRFGRPGYSPVVLVDTPLQFYERISYYVIAECCLVTAVRDGMNLIPYEYVICRQGNEKLDETLGISSSSPKKSMLVVSEFIGCSPSLSGAIRVNPWNVDAVAEAMEYALMAPESEKQLRHEKHYRYVSTHDVAYWARSFLQDLERACKDHVRRRCWGIGFGLGFRVIALDPNFRKLSVEHIVSAYKRTKNRAILLDYDGTMMLPGSISTNPKAEAVGILNSLCKDLKNVVFVVSGKDRTTITDWFSPCENLGIAAENGYFVRTNQNADWETCVSVPDFEWKQIALPVMQLYTDTTDGSTIETKESALIWNYQFADRDFGSCQAKELLDHLESVLANEPVSVKSGPHYVEVKPQGVNKGLVAEFLLSTMQRRGVLADFVLCIGDDRSDEDMFEMIISAKDSLSLSPVAEVFACTVGQKPSKAKYYLEDMTEILRMLQGLANASDNACRCSSQAAH* 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00393 854 Pfam Trehalose-phosphatase 594 827 IPR003337 GO:0003824|GO:0005992
Pte10g00393 854 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 720 851 - -
Pte10g00393 854 FunFam Alpha,alpha-trehalose-phosphate synthase 313 528 - -
Pte10g00393 854 Gene3D Glycogen Phosphorylase B; 51 311 - -
Pte10g00393 854 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 590 707 - -
Pte10g00393 854 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 548 - -
Pte10g00393 854 Gene3D Glycogen Phosphorylase B; 312 528 - -
Pte10g00393 854 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 46 840 IPR001830 GO:0003824|GO:0005992
Pte10g00393 854 Pfam Glycosyltransferase family 20 60 544 IPR001830 GO:0003824|GO:0005992
Pte10g00393 854 NCBIfam trehalose-phosphatase 589 839 IPR003337 GO:0003824|GO:0005992
Pte10g00393 854 SUPERFAMILY HAD-like 591 839 IPR036412 -
Pte10g00393 854 CDD HAD_TPP 592 827 - -
Pte10g00393 854 CDD GT20_TPS 60 544 IPR001830 GO:0003824|GO:0005992
Pte10g00393 854 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 311 - -
Pte10g00393 854 FunFam Trehalose-6-phosphate synthase 2 674 753 - -
Pte10g00393 854 Gene3D - 590 706 IPR023214 -
Pte10g00393 854 Gene3D - 716 853 IPR023214 -
Pte10g00393 854 NCBIfam HAD-IIB family hydrolase 593 794 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00393 Pte-Chr10 3372673 3376785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00393 1 839 Trehalose Biosynthesis Gene Families AT4G17770 80.000 0.0 1438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00393 K16055 - qsa:O6P43_025133 1529.61