Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00392 ATGGAAAAGGATATCTCTAATATCTCTCACACATGGGATGGAGAAATAAGCCAGTCTTCGAGGTCATGCATGGAGAAAAGGCTCAAGCTATTTGGGTTTGAGCTTAACCCTAGTAAGAAAAAAGAAGATACACATAAAGGGTCTGTCGAGGGAGGTGGTGAAGAGAGTGTCAACTCCTCGAATTCCGTTTCTTCCGGAGGAGATCAGCCTGACAAGGAGAAAAACTCAGCTGGAGATCTGCCCATATTGGATAAGAAATTTGAGTGCCAATATTGTTTCAAAGAATTCGGGAACTCACAAGCTCTAGGAGGCCATCAAAATGCTCACAAGAAAGAGAGAATGAAGAAGAAAAGACTGCAGCTTCAAGCCAGGAAAGCTAGCTTACATTATTACCTTCAGCCTTTGCAAAATAGTCATGGTTTCACTATCCATGGTTCAACTACTACACCATGGTTCTATGATCCTTCTTCATTGAACTCTCCGTTCACCCTGTATGAAGAATCTCAGATCAGCTTCAGCGAAGCAGCCAGTCTCAATAGTTCTGAACTTGTATCTAATTTGCATAGCTGTCAACAGCCTCATCGTCTCTCGTTCCAGCAAGACACAGCCATGTTCCCCGTAGCACATAGTGCTTCAAAAAGAACCAGTACTCATAAAAGGCCTTTGGTCTACAAGCCCTCTCCTCTTCCTGCTTCAAAGCATAGCCATAGTAGAGATTTGGATCTTCAGTTAGGCCTTAGTATGCAGATAGATATGAGAAGGACCTCATGA 771 0.4306 MEKDISNISHTWDGEISQSSRSCMEKRLKLFGFELNPSKKKEDTHKGSVEGGGEESVNSSNSVSSGGDQPDKEKNSAGDLPILDKKFECQYCFKEFGNSQALGGHQNAHKKERMKKKRLQLQARKASLHYYLQPLQNSHGFTIHGSTTTPWFYDPSSLNSPFTLYEESQISFSEAASLNSSELVSNLHSCQQPHRLSFQQDTAMFPVAHSASKRTSTHKRPLVYKPSPLPASKHSHSRDLDLQLGLSMQIDMRRTS* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00392 256 MobiDBLite consensus disorder prediction 1 21 - -
Pte10g00392 256 MobiDBLite consensus disorder prediction 34 79 - -
Pte10g00392 256 SUPERFAMILY beta-beta-alpha zinc fingers 84 114 IPR036236 -
Pte10g00392 256 MobiDBLite consensus disorder prediction 53 71 - -
Pte10g00392 256 MobiDBLite consensus disorder prediction 209 240 - -
Pte10g00392 256 ProSitePatterns Zinc finger C2H2 type domain signature. 89 109 IPR013087 -
Pte10g00392 256 MobiDBLite consensus disorder prediction 34 50 - -
Pte10g00392 256 PANTHER ZINC FINGER PROTEIN 5 18 248 IPR044299 GO:0010090
Pte10g00392 256 ProSiteProfiles Zinc finger C2H2 type domain profile. 87 114 IPR013087 -
Pte10g00392 256 Gene3D Classic Zinc Finger 80 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00392 Pte-Chr10 3346302 3347245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00392 84 130 C2H2 Transcription Factor Family AT1G68360 68.750 6.60e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00392 - - qsa:O6P43_033118 300.441