Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00385 ATGAAAGCTGCAGAGACGGACCCTATCAACCTATCAAACCAGCTCATATTATCTCTCCTGGAACAAATCCCACTCATTCAGAGTTTCAAAGGTAAATGGAATATCGTCAGAGCGAAACTTACTGATCTCCAAACCCAACTTAACGATTTCTCAGCCGAGTCACCTAATTGCTATTCCAACTCACTCTCCGCTGACCTCATCGACTCCATTCCCCATACGCTTAACGATGCCTTTTTGCTCGCACAGAACTGCCAGTGTTCTAATCTCCCTCAGGGAAAGCTCAAGACTCAGAGTGACATCGACTCGCTTTTGGCCAAGCTCGACCGCCATGTCAAAGATTGCGAGATACTAGTCAGGAGTGGGGTGCTTCATGAAGGTGCCGTTTCCGGGTCCTCCAAGAGGGAGGCTTTACAATCCGAGTTGAAGAACTTGATAACCCGTTTGCAGATTGGAAGCACCGAGTCTAAGAACTCGGCCATGGACGCCCTGCTTGGTTTGCTTCAAGAAGATGATAAGAACGTGATGATTGCCGTGGGACAGGGTGTGGTTTCCGTTCTCGCGCGATTACTGGATTCGAACTCCGCAGAAATGAAAGAGAAGACAGTGGCTGCAATATCTAGGGTTTCAATGGTTGATAGCAGCAAAAATGAGCTAATTGCTGAAGGCTTGTTGCTTCTGAATCAATTGCTTAGGGTTCTTGATTCAGGAAGTGGTTTTGCAAAAGAGAAAGCTTGCATAGCCCTTCAAGCTCTGAGCTTTTCGAAAGAGAACGCGAGGGCAATTGGATCTAGAGGTGGAATGGGTTCGCTATTGGAGATTTGCCACGCAGGCACACCTGGTTCCCAAGCGTCGGCAGCATGGGTATTGAGAAATCTGGCAGTTTTTACTGAAACTAGAGAAAATTTCATTGAGGAAAATGCAATTGTGATCCTTTTGGGGCTTGCTGCATCAGGAACTTCATTTGCCAAGGAAAATGTAATTGGATGTTTGGCTAATTTGGTGTCTGGTGAAGAAAGTCTGAAACTTTTGGTGGTTAAGGAGGGAGGAATTGAATGTTTGAAGAATTACTGGGACTGTGCTCCAGAAATTCAAAGTCTTGAAGTTGCCATTGAATTGCTAACTCACTTGGCTTCATGCCCACCTATTGGTGAAGTTCTTATTTCTGAGGGTTTTATATATAGACTTGTTGGAGTGGTGAACAGTGGGGTGTTGCGGGTGAGAATTGCAGCCGCTCGAGCTGTTTATGCTTTGGGATTCAGCTCCAAAACTAGAAAAGAAATGGGTGACTGTGGTTGCATCACCCCTTTGATTACAATGCTCGATGGTAAAGCTGTGGAAGAGAAAGAAGCGGCAGCGAAGGCATTGTCAGTTCTTTTGCTTTGTGCAAGTAATAGAAGGATTTTTCGCAAGGATGAAAGGGGGATTGTGAGTACAGTTCAGCTTCTGGATCGTGCCATACAGAATTTGGATAAGAAATACCCAGTTTCAGTTCTTGCCTCACTTGTGCATTCGAAGAAATGCAGAAAACAAATGGTTGCAGCTGGTGCTTATGTATATATTCAAAAACTAGTTGAGATGGATGTGGAAGGATCTAAGAAGCTCTCGGAAAGCCTTGGTCGCAGTAAGATATGGGGAGTTTTCTCGAGGCCTTAG 1653 0.4513 MKAAETDPINLSNQLILSLLEQIPLIQSFKGKWNIVRAKLTDLQTQLNDFSAESPNCYSNSLSADLIDSIPHTLNDAFLLAQNCQCSNLPQGKLKTQSDIDSLLAKLDRHVKDCEILVRSGVLHEGAVSGSSKREALQSELKNLITRLQIGSTESKNSAMDALLGLLQEDDKNVMIAVGQGVVSVLARLLDSNSAEMKEKTVAAISRVSMVDSSKNELIAEGLLLLNQLLRVLDSGSGFAKEKACIALQALSFSKENARAIGSRGGMGSLLEICHAGTPGSQASAAWVLRNLAVFTETRENFIEENAIVILLGLAASGTSFAKENVIGCLANLVSGEESLKLLVVKEGGIECLKNYWDCAPEIQSLEVAIELLTHLASCPPIGEVLISEGFIYRLVGVVNSGVLRVRIAAARAVYALGFSSKTRKEMGDCGCITPLITMLDGKAVEEKEAAAKALSVLLLCASNRRIFRKDERGIVSTVQLLDRAIQNLDKKYPVSVLASLVHSKKCRKQMVAAGAYVYIQKLVEMDVEGSKKLSESLGRSKIWGVFSRP* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00385 550 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 9 548 - -
Pte10g00385 550 Gene3D - 360 538 IPR011989 -
Pte10g00385 550 Gene3D - 128 358 IPR011989 -
Pte10g00385 550 SMART arm_5 295 335 IPR000225 GO:0005515
Pte10g00385 550 SMART arm_5 420 460 IPR000225 GO:0005515
Pte10g00385 550 SMART arm_5 254 294 IPR000225 GO:0005515
Pte10g00385 550 SMART arm_5 379 419 IPR000225 GO:0005515
Pte10g00385 550 SMART arm_5 336 378 IPR000225 GO:0005515
Pte10g00385 550 SMART arm_5 170 210 IPR000225 GO:0005515
Pte10g00385 550 SUPERFAMILY ARM repeat 140 515 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00385 Pte-Chr10 3249267 3251483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00385 127 407 U-box Gene Family AT2G23140 26.148 7.78e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00385 - - qsa:O6P43_030678 763.837