Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00382 ATGCTCTGCAGCAATGGTTGCCCCGCTGAGATGTACCAAAAAACTGAATGCAAATTGAAATCTAATAGGCAATGTGCATATAACTGCTCAACTTGCTTCTCAGCTGAATGCTACTCAAACTGTACTAATTCATACACTACTGTCATGGAAGGCAAGAAGGCTGAGAAATTTTGGTCACTGCAATTTTTGATTGTAATAGCAGAGATTTGTTTTGTAGTGCTATTAGTGAGTATTGTGTCTCTCACCTCAATTTTGTATGTTCCCTACAAGCTAAGGAACTTTAAATTTACAGAAAATGGTTTAAAGGACAAGGAACTTGCTGGAATTGGTTCTTCTCTTCAAAGAGACAGCCATAAGGTTCGTCCTGATTTCGAAGAGCTTAAGATTAGGAGAGGTCAGATGTTCACTTATGAGGAGCTTGAAAGAGCCACAGGTGGGTTCAGAGAAGAATCCATTGTTGGCAAGGGAAGCTTTTCCTGTGTGTTCAAAGGGACATTGAAAGATGGGACTGTTGTTGCAGTCAAAAGAGCAATCATGTTACCAAATATGCAGAAACATTCTAAAGAGTTTCCCACAGAGCTTGATTTGCTTTCTAGATTGAACCACGCTCATCTCCTCAACCTTCTTGGCTATTGTGAAGGTGGAGAAAGGCTGCTTGTTTATGAGTTCATGGCTCATGGATCACTGCATCAACATCTGCATGGAAAAAACAAAGCTTTGAGAGAGCAACTAGGTTGGGTTCGAAGGGTCACCATTGCAGTTCAAGCAGCTCGAGGAATCGAATACAGTTATGGTTGCCCTCCAGTGATTCACCGTGATACAAAGAATAGTGACGGAGACTCAGGGCAACCTCAGATGACAGGAGGAGTCTGTCAGAAATTAACAACGAATGATGCCCTGGCCTACCTGAAGGCAGTCAAGGATATGTTTCTAGATAAAAGGGAAAAATATGATGACTTTCTGGAAGTCATGAAAGATTTCAAGGCCCAAAGAATTGACACTGCAGGTGTTATAGCAAGAGTGAAGGAATTGTTTAAAGGGCATCGCGATTTAATTTTAGGGTTTAATACCTTCTTACCAAAGGGGTATGAGATCACTCTTGTACCAGAGGGTGAACAGCCTGCGCCAAAGAAGCCTGTGGAGTTTGAAGAAGCTATCAATTTTGTTAACAAAATTAAGACAAGATTTCAAGGTGATGATTATGTGTACAAATCATTTTTGGACATTTTGAATATGTACAGAAAGGAAAACAAGTCTATTAGAGAGGTTTACCAGGAGGTTGCAGCACTTTTCCATGATCACCACGACCTTCTTGTGGAATTCACTCATTTTCTCCCCGATTCTTCAGCACCAGCCTCCTCACATTATGTCCAATCAGTTCGGAATTCTATCCTCCGTGATAGGAACTCCGCCATGCCAACAACCCGGCACATGCATGCTGACAAAAAAGATAGGACTATGACTTCACATGGAGAACGAGACCGTGGTGTTGATCGTCCTGATCCAGGCCATGACAAGACTTTGATGAGAGCAGACAAAGAGCATTGGCGCATTGAAAAGGAAAAGGATCGGAGGGAGCGAGAAAGAGAAGATAGGGATTATGGTCATGATGGTAGTCGGGACATTAATATGGATTTCCCTAACAAACGTAAATGTAACCATAGAGCTGATGGCTCTACTGCAGAGCAATCACATCCAGGTGGGGATGGTGATGAGAAAATTGGCATGCGTCCTATATCCTCCTCTATTGATGACAGAAGTTCTGTAAAAAGTATATATAGCCAGGAATTTGCATTCTGTGATAAAGTGAAGGAAAAATTAAGAAACCCAGAGGATTACCAAGAATTTTTGAAGTGCCTCCATATTTATAGCAGGGAAATTATCTCCCGAACTGAATTACAGTCGCTGGTGGGTGATTTGCTGAGGAAGTATCCAGATCTTATGGATGGGTTTAATGATTTTTTGGCACGCTGTGAAAAGAATGATGGATTTCTTGCTGGTGTCATGAGTAAAAAATCCATGTGGAGTGAAGGGTCTCTCAAGGTAACGAAGGTTGAGGATAGGGACAGAGATCAAGATCGTGTTAGGGATGATGCTGTAAAAGAAAGAGATAATGAAGCACGAGGAAGAGAGAGACTGGAAAAAAATGCTGCTTGTCTCAATAAAGATGGCTCGAGCCACAAGATGTCTTTATTTTCCAGTAAGGATAAATATTTGATGAAACCCATACAGGAACTGGACCTATCCAATTTCGAGAGTTGCACTCCTAGTTACCGTCTCCTGCCACAAAATTACCCAATGCCTGTGGCTAGTCAGAGAACTGAACTCGGTGCTGAAGTCCTAAATGATCACTGGGTATCTGTGACTTCAGGAAGTGAAGATTACTCTTTTAAACACATGCGAAAAAACCAATACGAAGAGAGCTTGTTTAAATGTGAAGATGACAGGTTCGAGCTTGATATGCTGTTAGAGTCTGCGAATGTGACAACTAAGCGAGTAGAAGACTTGCTAGAGAAGATCAATAACCACACAATTAAAGACACCCATATCCATCTCGAGGAGCACTTCACAGCTCTGAATCTAAGGTGCATTGAGCGGTTATATGGTGACCATGGTCTTGATGTAACGGATGTGTTGAAAAAGAATGCACATCTTGCATTGCCAGTTATATTAATTCGTTTGAAGCAGAAGCAAGACGAATGGGCTAGATGTCGTGCCGATTTTAACAAAGTTTGGGCTGAAATATATGCTAAAAACTATCACAAATCCCTTGATCATCGTAGTTTCTATTTCAAGCAGCAGGATGCCAAGAACTTGAGCACAAAAGCCTTGTTAGCAGAAATTAAAGAAATCAGTGAAAAGAAGCGAAAGGAAGATGACGTGCTTCTTGCCATAGCTGCAGGAAATAGGCGACCTATTATCCCAAATTTGGAATTTGACTACCCTGATCCTGACATTCATGAAGATTTATATCAGCTCATCAAATATTCGTGTATGGAAGTTTGTACCACAGAACAGCTGGATAAACTCATGAAGATTTGGACAACCTTCCTCGAACCCACTCTTGGTGTTCCTCCTCGACCTCAGGATCCAGGAGATACCGAAGATGTTATAGAGCCCAAGAGTATTTCTTCCAAAAGTATAGCAGAAAGTGATGGTAGTCCTGGCATGGAAGCTGTAGTCTTGAATCCTAAGCAATCAAATCATTTTAGAAGCAGAGAAGATGTTGTTCCTCCAGAACAATCAAGTTCTAGCAGGGCTAGGCAAACCAATGGGGATAGCAGAGTTGAAGATAGTGGTCTGGATTTAGAGCGTAGGAGTGAAACAGTATCCAGCAGTGCAGAACCTGGTAAAGTAGAAACTAATACTTCTACCAGTGATAAATTGTCAGGATTTGACAAGCAAGAACATTCTAGTGAGCAGTTTGTGACGGGTAATGTATCATTGGCTGCTGCATTGGAGCAAAGCAATGGAAGAACTAAAACAGAAAAAGTATCAGGGCTTCATTCTTCTCCATCTAGAGCTGGGATGGTCACTACTGAGGGTGCACTTGATTTACCTTCATCGGAGGGTGGTGATTCTATGAGACCTTCAACATATAGGATGAAGTCTGAAGCTATTCAAGTTCACAGGCACCCAAGTGACAGAGAAGAGGGTGAATTATCTCCTAACGGAGATTTTGAGGAAGACAACTTTGCAGGATATCGGAATGGTGGTTTGGAGACTTTGCATAAAGTGAAGGAGGATAGCACCACTCAGCAGCATCCAAATCTGCAGGGGGATGTTGAGGCAGGAGGAGAAAATGATAGTGATGCAGATGATGAAGGTGAAGAAAGTCCTCAAAGATCGTCTGGGCGCAGTGAGAATGCTTCTGGTAATGGTGGAGTATCAGGAAGTGGAAGTGAGTCTGCTGATGGCGAAGACTGTTCCAGGGAGGACCATGAAGAGGACGGGGACAATGAGATAAATAACAAGGCTGAGAGTGAAGGCGAAGCAGAAGGGATGGTTGATGTGCACGATGTTGAAGGGGATGTTACATTATTGTCTTATTGTGAACGTTTTCTTCTCACTGTGAAGCCTCTGGCTAAGCATGTCCCCACAGTATTACAAGAGAAAAAGAAAATTTCACGAGTTTTCTACGGAAACGACTCCTTTTATTTGCTTTTCAGGCTTCATCAGACATTATATGAAAGAATACAATCTGCTAAAGTGAATTCGTCTTCTGGTGAAAGGAAGTGGAGGACTTCAAATGATTCTGGATCCCCTGATCTCTATGCCAGGTGA 4284 0.4206 MLCSNGCPAEMYQKTECKLKSNRQCAYNCSTCFSAECYSNCTNSYTTVMEGKKAEKFWSLQFLIVIAEICFVVLLVSIVSLTSILYVPYKLRNFKFTENGLKDKELAGIGSSLQRDSHKVRPDFEELKIRRGQMFTYEELERATGGFREESIVGKGSFSCVFKGTLKDGTVVAVKRAIMLPNMQKHSKEFPTELDLLSRLNHAHLLNLLGYCEGGERLLVYEFMAHGSLHQHLHGKNKALREQLGWVRRVTIAVQAARGIEYSYGCPPVIHRDTKNSDGDSGQPQMTGGVCQKLTTNDALAYLKAVKDMFLDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLVPEGEQPAPKKPVEFEEAINFVNKIKTRFQGDDYVYKSFLDILNMYRKENKSIREVYQEVAALFHDHHDLLVEFTHFLPDSSAPASSHYVQSVRNSILRDRNSAMPTTRHMHADKKDRTMTSHGERDRGVDRPDPGHDKTLMRADKEHWRIEKEKDRREREREDRDYGHDGSRDINMDFPNKRKCNHRADGSTAEQSHPGGDGDEKIGMRPISSSIDDRSSVKSIYSQEFAFCDKVKEKLRNPEDYQEFLKCLHIYSREIISRTELQSLVGDLLRKYPDLMDGFNDFLARCEKNDGFLAGVMSKKSMWSEGSLKVTKVEDRDRDQDRVRDDAVKERDNEARGRERLEKNAACLNKDGSSHKMSLFSSKDKYLMKPIQELDLSNFESCTPSYRLLPQNYPMPVASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFKCEDDRFELDMLLESANVTTKRVEDLLEKINNHTIKDTHIHLEEHFTALNLRCIERLYGDHGLDVTDVLKKNAHLALPVILIRLKQKQDEWARCRADFNKVWAEIYAKNYHKSLDHRSFYFKQQDAKNLSTKALLAEIKEISEKKRKEDDVLLAIAAGNRRPIIPNLEFDYPDPDIHEDLYQLIKYSCMEVCTTEQLDKLMKIWTTFLEPTLGVPPRPQDPGDTEDVIEPKSISSKSIAESDGSPGMEAVVLNPKQSNHFRSREDVVPPEQSSSSRARQTNGDSRVEDSGLDLERRSETVSSSAEPGKVETNTSTSDKLSGFDKQEHSSEQFVTGNVSLAAALEQSNGRTKTEKVSGLHSSPSRAGMVTTEGALDLPSSEGGDSMRPSTYRMKSEAIQVHRHPSDREEGELSPNGDFEEDNFAGYRNGGLETLHKVKEDSTTQQHPNLQGDVEAGGENDSDADDEGEESPQRSSGRSENASGNGGVSGSGSESADGEDCSREDHEEDGDNEINNKAESEGEAEGMVDVHDVEGDVTLLSYCERFLLTVKPLAKHVPTVLQEKKKISRVFYGNDSFYLLFRLHQTLYERIQSAKVNSSSGERKWRTSNDSGSPDLYAR* 1428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00382 1427 PANTHER SIN3B-RELATED 293 1427 IPR039774 GO:0003714
Pte10g00382 1427 MobiDBLite consensus disorder prediction 1112 1129 - -
Pte10g00382 1427 ProSiteProfiles PAH domain profile. 292 362 IPR003822 GO:0006355
Pte10g00382 1427 ProSiteProfiles PAH domain profile. 589 658 IPR003822 GO:0006355
Pte10g00382 1427 Pfam Protein tyrosine and serine/threonine kinase 151 273 IPR001245 GO:0004672|GO:0006468
Pte10g00382 1427 MobiDBLite consensus disorder prediction 1283 1304 - -
Pte10g00382 1427 MobiDBLite consensus disorder prediction 1136 1177 - -
Pte10g00382 1427 FunFam serine/threonine-protein kinase-like protein CCR1 117 223 - -
Pte10g00382 1427 Gene3D Paired amphipathic helix 587 660 IPR036600 GO:0006355
Pte10g00382 1427 MobiDBLite consensus disorder prediction 1316 1336 - -
Pte10g00382 1427 ProSiteProfiles Protein kinase domain profile. 147 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00382 1427 MobiDBLite consensus disorder prediction 686 710 - -
Pte10g00382 1427 SMART hdac_interact2seq4b 750 850 IPR013194 -
Pte10g00382 1427 Pfam Sin3 family co-repressor 753 844 IPR013194 -
Pte10g00382 1427 MobiDBLite consensus disorder prediction 1406 1427 - -
Pte10g00382 1427 MobiDBLite consensus disorder prediction 1205 1221 - -
Pte10g00382 1427 SUPERFAMILY PAH2 domain 593 658 IPR036600 GO:0006355
Pte10g00382 1427 MobiDBLite consensus disorder prediction 1091 1111 - -
Pte10g00382 1427 FunFam Paired amphipathic helix protein SIN3 587 660 - -
Pte10g00382 1427 Gene3D Phosphorylase Kinase; domain 1 118 223 - -
Pte10g00382 1427 SUPERFAMILY PAH2 domain 376 447 IPR036600 GO:0006355
Pte10g00382 1427 ProSiteProfiles PAH domain profile. 378 448 IPR003822 GO:0006355
Pte10g00382 1427 Gene3D Paired amphipathic helix 298 360 IPR036600 GO:0006355
Pte10g00382 1427 SUPERFAMILY PAH2 domain 290 361 IPR036600 GO:0006355
Pte10g00382 1427 ProSitePatterns Protein kinases ATP-binding region signature. 153 175 IPR017441 GO:0005524
Pte10g00382 1427 Gene3D Paired amphipathic helix 377 449 IPR036600 GO:0006355
Pte10g00382 1427 Gene3D Transferase(Phosphotransferase) domain 1 224 278 - -
Pte10g00382 1427 Pfam Paired amphipathic helix repeat 315 359 IPR003822 GO:0006355
Pte10g00382 1427 Pfam Paired amphipathic helix repeat 611 655 IPR003822 GO:0006355
Pte10g00382 1427 Pfam Paired amphipathic helix repeat 402 445 IPR003822 GO:0006355
Pte10g00382 1427 SUPERFAMILY Protein kinase-like (PK-like) 133 275 IPR011009 -
Pte10g00382 1427 MobiDBLite consensus disorder prediction 472 558 - -
Pte10g00382 1427 MobiDBLite consensus disorder prediction 467 582 - -
Pte10g00382 1427 Pfam C-terminal domain of Sin3a protein 1379 1407 IPR031693 -
Pte10g00382 1427 FunFam Paired amphipathic helix protein Sin3 298 360 - -
Pte10g00382 1427 FunFam Paired amphipathic helix SIN3-like protein 377 448 - -
Pte10g00382 1427 MobiDBLite consensus disorder prediction 1021 1336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00382 Pte-Chr10 3233877 3242651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00382 3 278 Receptor kinase-like Gene Family AT3G59420 61.071 9.97e-95 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pte10g00382 PK_Tyr_Ser-Thr 1.7e-17 CL0016
TR Others Pte10g00382 PK_Tyr_Ser-Thr 1.7e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00382 K11644 - cave:132177091 1579.69