Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00362 ATGGGAGTGGGTGCTAAGAATGGTCAAGTCGAATCCTGGGAAGTGTCCAAATCAAAAGGGAGGAGGAAGAAGAAGAAGGGTGATGAGGTTGTGGAAGAGGCAAAGACTGGATGCTGGTTAAGGCTGAGGTACTTCGGTAGCTGCATTTCTTCTAGATCCAAAGTTGATAGCTCAATTAGTGGCACCACTAATCATTATGCTGAAAGTAAATCGAACAATGACACAAATAGAGACCAATCAGCAGCCGCAATGATACCACCTTCAACAACAAGTAATGCAGAAAGTAATTCATCTACTTCGAAGCTTGAAGAGGAACTGAAAGCTTCTTCAAGGCTACGAAAATTTGGATTCAATGATCTCAAGTTAGCAACAAGAAATTTTAGACCAGAGAGTCTTCTTGGTGAAGGTGGTTTCGGATGTGTGTTCAAGGGATGGATTGAAGAAAATGGAACTGCTCCAGTTAAGCCTGGTACAGGGCTTACAGTTGCTGTGAAGACCCTTAACCATGATGGACTTCAGGGCCACAAAGAATGGCTGGCTGAAGTCAGTTTTCTTGGTGATCTGGTTCATCCAAACCTGGTTAAACTTATTGGTTACTGTATCGAAGATGATCAAAGGTTGCTAGTGTATGAATTCATGCCCCGTGGAAGCTTGGAAAATCACCTATTCAGGAGGTCTCTCCCTCTTCCATGGTCCGTTAGGATGAAAATTGCACTAGGAGCTGCAAAGGGTCTCGCCTTTCTTCATGAAGAAGCAAAAAGGCCAGTCATCTATAGGGATTTCAAAACATCCAACATCCTATTAGATGCAGATTACAATGCCAAGCTTTCTGATTTTGGACTTGCAAAAGATGGTCCAGAGGGAGATAAAACTCATGTTTCAACTCGTGTTATGGGAACGTATGGCTATGCTGCACCAGAATATGTCATGACCGGGCATCTAACTTCAAGGAGTGATGTTTACAGTTTTGGAGTGGTATTGCTTGAGATGTTGACTGGCAGGAGATCTATGGACAAAAACCGACCTAATGGAGAGCATAACCTTGTAGAATGGGCTAGACCACATTTGGCAGAGCGGAGGAGGTTTTACCGGTTAATAGATCCTCGGCTGGAAGGTCATTTTTCAATTAAAGGTGCCCAGAAGGCTGCACAGCTGGCTGCTCATTGCCTTAGTCGGGATCCGAAAGCTAGGCCTTTGATGAGTGAAGTTGTCGATGCCTTAAAGCCTCTGCCAAATCTTAAGGACATGGCAAGCTCTTCATATTATTTCCAGACCATGCAAGCTGAGCGCTTTAAGGCCAGCCCCAATTCTAGAAACGGACTTACACAGGTTGCAATGCTTTCCAAGAATGGGCAGCAGCAAAGGAGCCTTTCAATACCTAATGGCCCCCATGCTTCTCCTTATCACCATCAGTATCCCCGCCAATCACCACCACCTAATGGCAAAGCATAG 1452 0.447 MGVGAKNGQVESWEVSKSKGRRKKKKGDEVVEEAKTGCWLRLRYFGSCISSRSKVDSSISGTTNHYAESKSNNDTNRDQSAAAMIPPSTTSNAESNSSTSKLEEELKASSRLRKFGFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVSFLGDLVHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSVRMKIALGAAKGLAFLHEEAKRPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLAERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVDALKPLPNLKDMASSSYYFQTMQAERFKASPNSRNGLTQVAMLSKNGQQQRSLSIPNGPHASPYHHQYPRQSPPPNGKA* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00362 483 Gene3D Phosphorylase Kinase; domain 1 101 212 - -
Pte10g00362 483 MobiDBLite consensus disorder prediction 53 99 - -
Pte10g00362 483 MobiDBLite consensus disorder prediction 1 28 - -
Pte10g00362 483 Pfam Protein tyrosine and serine/threonine kinase 131 407 IPR001245 GO:0004672|GO:0006468
Pte10g00362 483 ProSiteProfiles Protein kinase domain profile. 127 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00362 483 SUPERFAMILY Protein kinase-like (PK-like) 105 407 IPR011009 -
Pte10g00362 483 MobiDBLite consensus disorder prediction 445 483 - -
Pte10g00362 483 FunFam Probable serine/threonine-protein kinase PBL8 213 428 - -
Pte10g00362 483 MobiDBLite consensus disorder prediction 53 103 - -
Pte10g00362 483 Gene3D Transferase(Phosphotransferase) domain 1 213 429 - -
Pte10g00362 483 MobiDBLite consensus disorder prediction 445 461 - -
Pte10g00362 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Pte10g00362 483 CDD STKc_IRAK 133 410 - -
Pte10g00362 483 PANTHER OS01G0588500 PROTEIN-RELATED 88 410 - -
Pte10g00362 483 FunFam Serine/threonine-protein kinase BIK1 94 212 - -
Pte10g00362 483 ProSitePatterns Protein kinases ATP-binding region signature. 133 165 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00362 Pte-Chr10 3055326 3058926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00362 75 407 Glycoside Hydrolase AT3G07070 54.167 1.34e-118 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte10g00362 PK_Tyr_Ser-Thr 5.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00362 - - qsa:O6P43_025413 847.81