Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00350 ATGGCAAGCAATGAAATGGCCTTCTTCCCAGCAAATTTTATGCTACAAACCCCTCACCACCACGAAAATCACGAACCTCCCAATTCTCTTAGCACAATTCTACCTTCCTGCTCACCTCAAGACTTTCATGGAGTGGCTTCTTTTCTGGGGAAGAGATCTATGTCTTTCCCTGGCATTGAATTGGCTGAAGAAACTATTGCAGAAGACGATTTGTCCGACGACGGATCACAGGCAGGGGAGAAGAAGAGAAGGCTCAACATTGAACAAGTGAAGACACTTGAGAAAAACTTCGAGTTGGGTAACAAGCTTGAACCAGAGAGGAAAATGCAGCTGGCGAGAGCTCTCGGTCTGCAGCCTAGACAAATTGCTATATGGTTCCAGAATAGGAGAGCCAGATGGAAGACGAAACAGTTGGAGAAGGACTATGATCTTCTCAAAAGGCAATTTGAAGCCATCAAAGCTGAGAATGAAACACTTCAAGCTCAGAATAAAAAGCTTCATGCTGAGGTATTGACACTAAAAAGTAGAGAACCAACTGAAGCTATCAATCTCAATAAGGAGACAGAAGGGTCCAGCAGCAATAGAAGTGAGAACAGTTCTGAAATCAATTTGGATATCTCAAGGACACCTGCTATTGAAAATGAGTCTACTCATCCAACCAGCAGATCTTTCTTCCCAACAAACATAAGACCTACTGGTTTGGCACAGCTTTTCCAGACTTCTCCAAGGCCAGAACTCCAATGCCAAAAGATGGATCAAATTGTGAAAGAAGAAAGCTTAAGCAACATGTTTTGCAATATGGATGACCAATCTGGACTTTGGCCATGGTTGGAGCAGCAACAGTTCAATTGA 852 0.4319 MASNEMAFFPANFMLQTPHHHENHEPPNSLSTILPSCSPQDFHGVASFLGKRSMSFPGIELAEETIAEDDLSDDGSQAGEKKRRLNIEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAIKAENETLQAQNKKLHAEVLTLKSREPTEAINLNKETEGSSSNRSENSSEINLDISRTPAIENESTHPTSRSFFPTNIRPTGLAQLFQTSPRPELQCQKMDQIVKEESLSNMFCNMDDQSGLWPWLEQQQFN* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00350 283 Gene3D - 73 142 - -
Pte10g00350 283 MobiDBLite consensus disorder prediction 180 205 - -
Pte10g00350 283 ProSitePatterns 'Homeobox' domain signature. 111 134 IPR017970 GO:0000981|GO:0006355
Pte10g00350 283 Pfam Homeobox associated leucine zipper 136 176 IPR003106 GO:0006355|GO:0043565
Pte10g00350 283 SUPERFAMILY Homeodomain-like 74 138 IPR009057 -
Pte10g00350 283 PRINTS Lambda-repressor HTH signature 116 132 IPR000047 GO:0003677
Pte10g00350 283 PRINTS Lambda-repressor HTH signature 107 116 IPR000047 GO:0003677
Pte10g00350 283 ProSiteProfiles 'Homeobox' domain profile. 76 136 IPR001356 GO:0003677
Pte10g00350 283 FunFam Homeobox-leucine zipper protein ATHB-13 73 140 - -
Pte10g00350 283 MobiDBLite consensus disorder prediction 184 205 - -
Pte10g00350 283 Coils Coil 128 176 - -
Pte10g00350 283 CDD homeodomain 81 137 IPR001356 GO:0003677
Pte10g00350 283 Pfam Homeodomain 81 134 IPR001356 GO:0003677
Pte10g00350 283 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 68 251 IPR045224 GO:0003700
Pte10g00350 283 SMART HOX_1 79 140 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00350 Pte-Chr10 2960876 2964033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00350 2 284 Homeobox Transcription Factor Family AT1G69780 61.921 8.10e-115 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte10g00350 Homeodomain 5.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00350 K09338 - qsa:O6P43_025435 467.233