Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00347 ATGTGGATAAGGGGTTTTGTATGCTTGGCTTTTCTGGTCTTTGGGGTGTTCTCTCAAGAACCTCTGCTTGGATCAACTCGTGTTGTCTTCCAGACGAATTATGGTGATATTGAATTTGGTTTCTATCCTACGGTTGCACCTCAAACTGTTGATCACATTTTCAAACTCGTGCGTCTTGGGTGCTATAATACGAACCATTTTTTCCGGATTGACAAGGGTTTTGTGGCACAAGTGGCGGATGTTATGGGTGGAAGATCTGCACCTATGAATGAAGATCAAAGGAAAGTAGCTGACAAGAATGTTGTGGGCGAATTTAGTGAAGTCAAACACGTAAGAGGTATTCTCTCCATGGGGAGATATGATGATCCAAATAGTGCATCGTCATCATTTTCAATACTTCTGGGAGATGCTCCACATCTGGATCATCAGTATGCGATATTCGGCAAGGTAACTAAAGGGGATGATACATTGAAGAAGCTTGAACAACTTCCTACTCGTCAAGAGGGTATCTTTGTAATGCCAAAGGAGCGCATCACAATTTTGTCATCCTATTATTACGATACTGAGATGGAAAGTTGTGAGCAAGATAGATCAATTTTGAAGCGTCAGCTTGCAGCATCAGCTGTTGAAATTGAAAAGCAGAGGATGAAATGCTTCTACTGA 663 0.4163 MWIRGFVCLAFLVFGVFSQEPLLGSTRVVFQTNYGDIEFGFYPTVAPQTVDHIFKLVRLGCYNTNHFFRIDKGFVAQVADVMGGRSAPMNEDQRKVADKNVVGEFSEVKHVRGILSMGRYDDPNSASSSFSILLGDAPHLDHQYAIFGKVTKGDDTLKKLEQLPTRQEGIFVMPKERITILSSYYYDTEMESCEQDRSILKRQLAASAVEIEKQRMKCFY* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00347 220 CDD cyclophilin 29 182 - -
Pte10g00347 220 Gene3D - 18 193 IPR029000 -
Pte10g00347 220 SUPERFAMILY Cyclophilin-like 23 188 IPR029000 -
Pte10g00347 220 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 28 182 IPR002130 GO:0000413|GO:0003755
Pte10g00347 220 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 6 219 IPR044233 -
Pte10g00347 220 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 142 157 IPR002130 GO:0000413|GO:0003755
Pte10g00347 220 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 128 IPR002130 GO:0000413|GO:0003755
Pte10g00347 220 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 67 79 IPR002130 GO:0000413|GO:0003755
Pte10g00347 220 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 56 IPR002130 GO:0000413|GO:0003755
Pte10g00347 220 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 29 185 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00347 Pte-Chr10 2909696 2913342 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00347 28 186 U-box Gene Family AT5G67530 27.500 4.66e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00347 - - qsa:O6P43_033038 372.859