Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00342 ATGATCATGGAAGAAGATCGTCGAAATGGGATCGGTAGACCAAATTTTTCATTGCAGTTGTTGGAGAAAAGAGAAGAAGTTGCAGCAAGCTCAAGTAGTAGTTCAAGCTATACAGCTAATTTGTCTATACCGGGTAGTACTGATGTTAGAGAGACAAGCACAGACCCCAGCAGACAAAACTCAAGTCTCCAAGTGTCTGAGCAACCCAAGAAGCCACCACCTAAGAGGACTTCAACAAAAGATAGGCACACAAAAGTGGACGGCCGTGGCCGCCGGATCAGAATGCCTGCAGCTTGTGCTGCTAGAGTTTTTCAACTGACCAGAGAGCTTGGCCACAAGTCCGATGGTGAAACTATTGAGTGGCTCCTCCAACAGGCAGAGCCATCTGTAATTGCAGCCACAGGCACCGGCACCATCCCCGCCAATTTCACTTCTCTTAACATTTCTCTTCGCAGCTCTGGTTCCACCATGTCAGCACCTTCCCACTACTTCAGAAGCAATTACTTGAACCCCAGCTTTTCTACAATGGCCCAGTTGATGGCTCGAACTAGTACCACTAGTGGTTCTGATCAGTGGGAGAGAAACTTGAATATGGCTATGGACGAGTCTCGCAGGATTTTCTTTCCTGGGATTGTAGGGTTATCATCGTCGACTGATCATAATTCAACAATGTCTACTGACTTAAATTTCAATTCTGGAGATAACGTGAATGCCATTTTGCAAGCAAAGCAAGAACTTCGAGAAGAGACTGCAGCTGGCAGTGGTGGGGGGCTGGAATTGACGTCAGATTCTCAAGATGCCAACCGTAACATTGGAAGAAAACCAAGGCCGGAGCAAGAGTTGTCGCAAAACCAGATAGGAAACTATTTGTTACAGTCCAGTACAGGTCCACTTCCTGCAAGTCACAATTCAACCCCTGCACCATTTTGGATGGTAGCAAATAGTCCAAATAGCCAAGTTATGGCAAGTGGTGGCGGTGGGGGAGGTGGTGACTCCGTTTGGCCATTTCCTTCTGTCAACAATGCTAGTACAATGTACCGAGGGTCTGTGCCTGGTGGTGGGATTCACTTCATGAACTTTGCTTCTCCAATGCCTTTAATGCCAGGGCAGCAATTTAGCGCTGGAGTTGGTGGTGGAAGCGGTGGTACATTGGTGACTGATAGTCAATTCGGCATGCTTGCGGCCCTTAATGCATACAGACAGATTCCACAAAATAGTCACGCATCGGAGACGCCGGGTAGCACTGGCGCACAGCAGCCTCTTCACGCAGGCGGTAAGAGACACGAACAAAACAGTCATCACCATTCCTAA 1311 0.4798 MIMEEDRRNGIGRPNFSLQLLEKREEVAASSSSSSSYTANLSIPGSTDVRETSTDPSRQNSSLQVSEQPKKPPPKRTSTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLRSSGSTMSAPSHYFRSNYLNPSFSTMAQLMARTSTTSGSDQWERNLNMAMDESRRIFFPGIVGLSSSTDHNSTMSTDLNFNSGDNVNAILQAKQELREETAAGSGGGLELTSDSQDANRNIGRKPRPEQELSQNQIGNYLLQSSTGPLPASHNSTPAPFWMVANSPNSQVMASGGGGGGGDSVWPFPSVNNASTMYRGSVPGGGIHFMNFASPMPLMPGQQFSAGVGGGSGGTLVTDSQFGMLAALNAYRQIPQNSHASETPGSTGAQQPLHAGGKRHEQNSHHHS* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00342 436 MobiDBLite consensus disorder prediction 405 436 - -
Pte10g00342 436 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 30 410 IPR005333 GO:0003700
Pte10g00342 436 MobiDBLite consensus disorder prediction 73 89 - -
Pte10g00342 436 MobiDBLite consensus disorder prediction 24 89 - -
Pte10g00342 436 ProSiteProfiles TCP domain profile. 79 133 IPR017887 -
Pte10g00342 436 MobiDBLite consensus disorder prediction 247 282 - -
Pte10g00342 436 MobiDBLite consensus disorder prediction 26 72 - -
Pte10g00342 436 Pfam TCP family transcription factor 77 195 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00342 Pte-Chr10 2875489 2877714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00342 59 371 TCP Transcription Factor Family AT3G47620 44.286 4.55e-57 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte10g00342 TCP 5.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00342 - - qsa:O6P43_025447 506.523