Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00340 ATGGATGTCTCAGAAATTGCAAAGAAGCTAGGGATGGCCGAGTCCAAGCCCGTGATCCGAAAAGCAGCGGAGTTGCGGCGTCTCTGCGACCTCCAGTTCGATTCTTCAGTCACAAGAGTTGGAGAGGTCTGTAAAGCCGTCATCTGCTTGGAAATTGCCGCAACGAGGTTTTCAAATAATAAAATCTCTAATATCATTGGTATTCATTGTAAGATTTATTTGATGGGTTATATCCTAAGAAACTTGAACAGATTGGGTGTTATTTTTGATCGTTCAACCGCTATAAAGTTGAGTGGAATGTCAGAAAAGGCTTACAGTAGATCGTACAATTCGTTGCACAACGGTCTTGGAGCCCAGGCGAAGCTGGATGTAAGAGTATTGGCTATTCAATTTGGGTGCCTAAGAATGATTCCATTGGTGCAGAATGGTCTCAAGCTTTACCAAGACCGGTTTCTTTCTGCGTTGCCATCTTCTAGACGTGCAAGTGCTGACTTCAGCCGGCCTGTATTTACTGCTGTTTCATTTTATTTATGTGCCAAAAAGCAGAAGCTAAGAGTGGACAAAATTAAGTTGATTGAGGTTTGTGGTACATCAGAATCGGAGTTTTCTTATGTTTTTGAGTCAATGAAGGACCTGTGCCATGACATTTTTGGGGTCGCTATGGAAAAGGAACACAAAAAGAATGTGAAGGCCAACCAAGCTTTCACATCAGAAGAAGCGCAAGCGAATAGAAAAAATGGGATTCTGAAAGACGGGAATTTTCTGTCCTGGCATGCCATAAAACTAGAGCAGAAGATCCTTGCACGCGGACCAGGCGGACTTCCCCAGCTTTCTGAAGGAATTTTTGTGAGGCCTAGAAGTTGGATGGATGCCATGAGATTCTTTACATCAATCATTTTGACTTTTGGCGATGTGCGACTGACTCTGAAGGACATTCACAGAAGGAATTGGAACGAAGAGGCAAGATAA 969 0.4314 MDVSEIAKKLGMAESKPVIRKAAELRRLCDLQFDSSVTRVGEVCKAVICLEIAATRFSNNKISNIIGIHCKIYLMGYILRNLNRLGVIFDRSTAIKLSGMSEKAYSRSYNSLHNGLGAQAKLDVRVLAIQFGCLRMIPLVQNGLKLYQDRFLSALPSSRRASADFSRPVFTAVSFYLCAKKQKLRVDKIKLIEVCGTSESEFSYVFESMKDLCHDIFGVAMEKEHKKNVKANQAFTSEEAQANRKNGILKDGNFLSWHAIKLEQKILARGPGGLPQLSEGIFVRPRSWMDAMRFFTSIILTFGDVRLTLKDIHRRNWNEEAR* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00340 322 CDD Orc6_mid 121 216 - -
Pte10g00340 322 Pfam Origin recognition complex subunit 6 (ORC6) 4 119 IPR008721 GO:0003677|GO:0005664|GO:0006260
Pte10g00340 322 Gene3D - 120 217 - -
Pte10g00340 322 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 1 59 IPR020529 GO:0005664|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00340 Pte-Chr10 2857114 2860028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00340 1 233 Core DNA Replication Machinery Family AT1G26840 59.227 2.35e-92 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00340 K02608 - gmx:100777539 295.049