Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00333 ATGCTTCAAAGCTTGGTTCCACGATCACCCATCAGCTCTGCGTCCAATCCAAGTTCATCCATGAAGTCAAAGCGTGTTGCCCGTGATTTCGCCACAGGTGACTCCTCCGCGCCTGAAGAACCGTCCGTGTTCAAGAGACAAAACTCCATCAAGAATTTCCCCGCTGAGGCCAGTGAATCGGGTGAGAAAACCGAAGGCAGAGAAGAGTCCGCAGTCATCGAAGGTGAGTCAACCGGGTTAAAACTTCTTGGGTTGCTGTTGCAATGCGCGGAGTGTGTAGCTATGGATAATCTTGACGACGCCAGCGATCTCTTGCCTGAAATTGCAGAGCTCTCTTCCCCGTTCGGCACCTCACCTGAACGAGTCGGCGCGTACTTCGCACACGCACTTCAAGCACGCGTGATCAGTTCCTGCCTCGGTAGCTACTCTCCACTCACTACCCAATCTCTAACCCAAACTCAGTCTCAGCGATTTTTCAACGCTTTCCAGTCTTACAACTCAATCAGTCCACTCGTCAAGTTCTCTCACTTCACAGCCAACCAAGCTATCTTCCAAGCTTTGGATGGTGAGGATCGTGTCCACGTCATTGACCTTGACATCATGCAAGGACTTCAATGGCCAGGATTGTTCCACATACTTGCCTCGCGTTCAAAGAAGATCCGCTCCGTGAGAATAACTGGGTTCGGTTCCTCGTCCGAACTACTGGAATCAACAGGGAGAAGACTCGCTGACTTCGCAAGTTCACTCGGGTTGCCCTTTGAGTTTCACCCATTGGAGGGTAAAATCGGAAGCGTGACGGATCTTAATCAACTCGGTATTCGACCGGGTGAGGCTACCGTGGTTCACTGGATGCATCATTGTCTGTACGACATAACAGGGAGTGATTTCGGGACGTTGAGATGGTTGACTTTGTTGAGACCCAAGTTGATCACGATCGTGGAACAAGACCTGAGTCACGCGGGAAGCTTCTTAGGGAGGTTTGTGGAAGCCTTACATTACTATAGCGCGTTGTTCGACGCGCTTGGGGATGGGTTGAGTGCAGAGAGTGTAGAGAGGCATACGGTGGAGCAGCAATGGTTTGGGTCAGAGATAAGGAATATCGTAGCCGTGGGCGGGCCTAAAAGAACCGGAGAGGTGAAGGTGGAGAGGTGGGGCGATGAGTTCAAACGGGTTGGGTTTAAGCTGGTGTCATTGCGGGGCAACCCGGCTTCGCAGGCCAGCTTGTTGCTGGGTATGTTCCCGTGGAAAGGGTACACTTTAGTGGAGGAAAACGGGTCTCTCAAATTGGGGTGGAAGGATCTTTCATTGTTGACCGCATCAGCTTGGCAGCCGTCCGATTGA 1341 0.5183 MLQSLVPRSPISSASNPSSSMKSKRVARDFATGDSSAPEEPSVFKRQNSIKNFPAEASESGEKTEGREESAVIEGESTGLKLLGLLLQCAECVAMDNLDDASDLLPEIAELSSPFGTSPERVGAYFAHALQARVISSCLGSYSPLTTQSLTQTQSQRFFNAFQSYNSISPLVKFSHFTANQAIFQALDGEDRVHVIDLDIMQGLQWPGLFHILASRSKKIRSVRITGFGSSSELLESTGRRLADFASSLGLPFEFHPLEGKIGSVTDLNQLGIRPGEATVVHWMHHCLYDITGSDFGTLRWLTLLRPKLITIVEQDLSHAGSFLGRFVEALHYYSALFDALGDGLSAESVERHTVEQQWFGSEIRNIVAVGGPKRTGEVKVERWGDEFKRVGFKLVSLRGNPASQASLLLGMFPWKGYTLVEENGSLKLGWKDLSLLTASAWQPSD* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00333 446 MobiDBLite consensus disorder prediction 41 55 - -
Pte10g00333 446 ProSiteProfiles GRAS family profile. 73 443 IPR005202 -
Pte10g00333 446 Pfam GRAS domain family 84 443 IPR005202 -
Pte10g00333 446 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 62 438 IPR005202 -
Pte10g00333 446 MobiDBLite consensus disorder prediction 58 72 - -
Pte10g00333 446 MobiDBLite consensus disorder prediction 1 25 - -
Pte10g00333 446 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00333 Pte-Chr10 2794562 2795902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00333 21 447 GRAS Transcription Factor Family AT5G41920 65.046 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte10g00333 GRAS 7e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00333 - - zju:107404603 706.442