Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00329 ATGGACCTGAATACCAGCAACAAGATCTCAGATATTGATACTCAGACCCCATCACCACCACCGAGGATCCAACCTACCATCAAATATTATTTTCCTTTCACAAACGCCTCCTCCGAATGCCATGCCTCAGCTCAACCTCAGCCACCTGCATCACCAGCACTCAGAGTGGTTTCATACAAGGAATGCCTCAAAAACCATGCTGCTACCATAGGTGGCTATGCCATGGATGGTTGTGGTGAGTTCTTGCCTTCAGCTACCTTCAGTTCCAACAACGACCCTACTTCACTAAAATGTGCTGCATGCGGCTGTCACCGAAATTTTCACCGCCGGGCAACTCAATATTCCAATCCCAACTCCCTCAACCGCATCTACCCTTTACCACAGGCAGCACCGCCGCCACTTCCAAGGGGTCTGGGTCTGAGTCCAAGCTCACTTAACAGCCGCAGTGCTAGCCCCAGCCCCAGCATTCCAAGTCCTGAGTCAAGTCCCTCACCTCCACCACTTTCTCAATTTTCCGCACCGTCGTACTATGCATCTGCACCCCATATGCTGTTAGCGGTCGGCAACACACACGGCACTGCAGCAACTGAACAACGGCACAGTAGTACGACTTCCAACAATACGGATATGAAGACTGAAGACCGAACTGGGAAAAAGAGATCCAGGACGCAATTAAGCCGGGAGCAGAAGGAGAAGATGTATCGGTTCTCTGAGAAATTGGGCTGGAAAATGCAGAGGGTAGAGGAGAAGTTGGTCCTGGAATTCTGCGATGAGATTGGTGTCAGCAGATCTGTCTTCAAGGTCTGGATGCATAACAACAAAAGCACCTTCAGCAAAAGATAA 843 0.5006 MDLNTSNKISDIDTQTPSPPPRIQPTIKYYFPFTNASSECHASAQPQPPASPALRVVSYKECLKNHAATIGGYAMDGCGEFLPSATFSSNNDPTSLKCAACGCHRNFHRRATQYSNPNSLNRIYPLPQAAPPPLPRGLGLSPSSLNSRSASPSPSIPSPESSPSPPPLSQFSAPSYYASAPHMLLAVGNTHGTAATEQRHSSTTSNNTDMKTEDRTGKKRSRTQLSREQKEKMYRFSEKLGWKMQRVEEKLVLEFCDEIGVSRSVFKVWMHNNKSTFSKR* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00329 280 MobiDBLite consensus disorder prediction 1 17 - -
Pte10g00329 280 MobiDBLite consensus disorder prediction 140 155 - -
Pte10g00329 280 MobiDBLite consensus disorder prediction 191 230 - -
Pte10g00329 280 SUPERFAMILY Homeodomain-like 204 279 IPR009057 -
Pte10g00329 280 MobiDBLite consensus disorder prediction 114 173 - -
Pte10g00329 280 NCBIfam homeobox domain, ZF-HD class 218 274 IPR006455 -
Pte10g00329 280 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 59 111 IPR006456 -
Pte10g00329 280 MobiDBLite consensus disorder prediction 156 170 - -
Pte10g00329 280 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 59 111 IPR006456 -
Pte10g00329 280 Gene3D - 202 279 - -
Pte10g00329 280 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 43 276 - -
Pte10g00329 280 MobiDBLite consensus disorder prediction 1 23 - -
Pte10g00329 280 MobiDBLite consensus disorder prediction 191 210 - -
Pte10g00329 280 MobiDBLite consensus disorder prediction 211 230 - -
Pte10g00329 280 Pfam ZF-HD protein dimerisation region 57 112 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00329 Pte-Chr10 2749515 2750982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00329 1 274 ZF-HD Transcription Factor Family AT5G15210 42.446 9.72e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Pte10g00329 ZF-HD_dimer 3.9e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00329 - - qsa:O6P43_033018 239.965