Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00321 ATGGATAGAGAAAGACGGTGCGGCAGATGGGGTGAACGTGAGTATTCATCCATTCTACGAGCTAATGTGTTTGACAGAGGTTGTTGCGTCAAAGCCCTCATGTTCTTCTGCAACGAAAAGAAAGGTGTCAAGCCTGCACAAGGCATGGTTTCTGCTGATGCCTCAAACTCAAAAGCACTATTGTTTGTGCAAACTGTTATAGGAAATGAAGGCATGGACAACAGGTGTGATTTATATGCATCATCAAACAACGCAAATGGCCTCATCTTTTGCCCATCTCCTTGTACTTCGACCTTTTCTTCAATGAGCAGTACGGTCTATGCAGACATGAGTTCTCTCTCTCTCAGTTCCAACCACGGAAGGCCTTCAACTGTTTCTGCTTCTTCTCAACAAAGTAGTTACGGAGGTAGGAGTAGCTGTGAGATGGAAACTGGGGGAAATAACTGGACTTTCCCTTTCACGAGGGACTGTCTTATTGCAAGAAACAGTGAGGAGTACCGTAGCAGTGATGATAAAGCCTCTGACTCTAGTGATGGAGTTGGTGAGGACAGTGAGGATTTAAATCACAACGTAAACCTTATCGACAGAAACCTCAATGGTAAACTTGTTAATGGCAAGGAGGCAGATGGTGGGTCTAAACTCTGTGCAAGAGGCCATTGGAGGCCTGCAGAAGACGCAAAGCTTAAGCAGCTCGTTGCGCTTTATGGTCCTCAGAACTGGAACCTCATAGCAGAGAAGCTGGAGGGAAGATCAGGTAAGAGCTGTAGATTGAGATGGTTCAATCAGTTAGACCCCAGGATCAATAGGAGAGCTTTCAGTGAAGATGAAGAAGAGAGACTGATACAAGCTCATAGAGTTTATGGCAACAAATGGGCCTTGATAGCTAGACTCTTCCCTGGGAGAACAGATAACGCGGTTAAGAATCACTGGCATGTTATAATGGCTAGAAAGTACAGAGAGCAATCCAGTGCTTACAGGAGGAGGAAACTGAGTCAAAATGTTTATAGAAGAATGGAGGACAATCCATTGTTTGCCGATGCTGCTAGAAGAACAGAATCATCACCCTACTTTCTCAATGCTTTCTGCTATGGAGGATTCAACACTATCTCCAGTAGTTATCCGAATGGATCTTTTCATGGACATTTTGGTGGGATTGACTATGCCTTGAATTCTAAACCCCACTTGACTGGTGGGAGAGAAACAAACTCAGGCAGCAAGGTCCCTCCTCAGAATGTGTTAGGTTCGCAACAAAAATTACCATTTGATTCCTTAACTGGTTCCAAGAGCAATGACACGTTGAGTATAATCAGCGAAAGCAGCTACTGGGATAGGCCAACAAGTGATGAAGCTTGCATATCTGGTTCTGGTCTATATCCTCCTCAATATCCATATAGTATGCCAATGCAACTGTCAAATAATCACGAGGTCTACAGTTTTTCAAATTCCACAGCAACCACAGGCAATGCCTCAGCCAGTGAACCTTCTTCATCTGCTGCAGAGACCAGAGTAGTCATACATGATACAACTTCTGCTGCTGCTGCTACCGAGACCGTCTCACCTCTATTTATTGACTTTCTTGGAGTTGGAGCCAGGTGA 1596 0.4455 MDRERRCGRWGEREYSSILRANVFDRGCCVKALMFFCNEKKGVKPAQGMVSADASNSKALLFVQTVIGNEGMDNRCDLYASSNNANGLIFCPSPCTSTFSSMSSTVYADMSSLSLSSNHGRPSTVSASSQQSSYGGRSSCEMETGGNNWTFPFTRDCLIARNSEEYRSSDDKASDSSDGVGEDSEDLNHNVNLIDRNLNGKLVNGKEADGGSKLCARGHWRPAEDAKLKQLVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEDEEERLIQAHRVYGNKWALIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRKLSQNVYRRMEDNPLFADAARRTESSPYFLNAFCYGGFNTISSSYPNGSFHGHFGGIDYALNSKPHLTGGRETNSGSKVPPQNVLGSQQKLPFDSLTGSKSNDTLSIISESSYWDRPTSDEACISGSGLYPPQYPYSMPMQLSNNHEVYSFSNSTATTGNASASEPSSSAAETRVVIHDTTSAAAATETVSPLFIDFLGVGAR* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00321 531 MobiDBLite consensus disorder prediction 117 140 - -
Pte10g00321 531 SMART sant 268 316 IPR001005 -
Pte10g00321 531 SMART sant 216 265 IPR001005 -
Pte10g00321 531 Gene3D - 217 268 - -
Pte10g00321 531 PANTHER MYB PROTEIN-RELATED 192 421 - -
Pte10g00321 531 SUPERFAMILY Homeodomain-like 217 310 IPR009057 -
Pte10g00321 531 CDD SANT 220 261 IPR001005 -
Pte10g00321 531 FunFam MYB transcription factor 270 340 - -
Pte10g00321 531 FunFam MYB transcription factor 217 268 - -
Pte10g00321 531 Pfam Myb-like DNA-binding domain 217 263 IPR001005 -
Pte10g00321 531 Pfam Myb-like DNA-binding domain 269 312 IPR001005 -
Pte10g00321 531 ProSiteProfiles Myb-like domain profile. 217 263 IPR001005 -
Pte10g00321 531 MobiDBLite consensus disorder prediction 168 187 - -
Pte10g00321 531 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 264 318 IPR017930 -
Pte10g00321 531 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 217 263 IPR017930 -
Pte10g00321 531 CDD SANT 271 311 IPR001005 -
Pte10g00321 531 Gene3D - 270 340 - -
Pte10g00321 531 ProSiteProfiles Myb-like domain profile. 264 314 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00321 Pte-Chr10 2693145 2696110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00321 215 346 MYB Transcription Factor Family AT1G69560 78.947 2.74e-73 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte10g00321 Myb_DNA-binding 2.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00321 K09422 - vvi:100253313 448.743