Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00305 ATGGCTGCTGGAAAACCAAGCTCTCAACAGCTCCCACCTGGATTTAGGTTCCATCCAACTGATGAAGAACTCATTATGCACTACCTTCGTAACCAGGCAACCTCAAGACCACTACCTGTGTCCATTATCCCAGAAGTGGATATTTATAAATTTGACCCGTGGGAATTCCCTGGTGAATCTGAATTTGGTGAAAATGAAAGGTACTTCTTTACACCGAGAGAAAGGAAGTATCCCAATGGGGTAAGGCCTAATAGAGCTACTGTCTCAGGATATTGGAAAGCAACAGGGACTGACAAGGCAATTTACAGCGGAGCAAAATATGTTGGGGCGAAGAAAGCACTTGTGTTCTACAAGGGCAGGCCACCCAAGGGTGTGAAGACTGATTGGATTATGCATGAGTACATACTGAGTGAATCAAGAGGGACTAGAAAGCAAAATGGTTCTATGAGACTGGATGATTGGGTGCTGTGCAGGATTTACACGAAGAAGCACTTGGCAAAAGCTAAGGAGAAAAATGAAGAACCAAGTGCTTCATTTAACATGGGAGTTAACGTTGTCAATGAACAGCAGATGATGATAAAGTTTCCTAGGACTCGTTCCTTTACCACCAATCTTCTGGAAATGGAGTTTGGTCAGTTACTAGAGGACAGTAGCTATAACAACCCAGCTCTTGATTTCCAAACCAACATAGGAAACACTGGACATGTCTATGATGAGAAACCTTATATTGGTCAAGTGCATGCACAATATGCACCAGATTCAGAGAAGTTATTATTGAACCCCATCAGCATGAACAACCAGTCAATACTGTATGGGAATCAGGTGTATGACTCGTTTGGATTTGAAAGATAA 852 0.4249 MAAGKPSSQQLPPGFRFHPTDEELIMHYLRNQATSRPLPVSIIPEVDIYKFDPWEFPGESEFGENERYFFTPRERKYPNGVRPNRATVSGYWKATGTDKAIYSGAKYVGAKKALVFYKGRPPKGVKTDWIMHEYILSESRGTRKQNGSMRLDDWVLCRIYTKKHLAKAKEKNEEPSASFNMGVNVVNEQQMMIKFPRTRSFTTNLLEMEFGQLLEDSSYNNPALDFQTNIGNTGHVYDEKPYIGQVHAQYAPDSEKLLLNPISMNNQSILYGNQVYDSFGFER* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00305 283 Pfam No apical meristem (NAM) protein 12 135 IPR003441 GO:0003677|GO:0006355
Pte10g00305 283 SUPERFAMILY NAC domain 8 162 IPR036093 GO:0003677|GO:0006355
Pte10g00305 283 PANTHER NAC TRANSCRIPTION FACTOR 56 11 192 - -
Pte10g00305 283 ProSiteProfiles NAC domain profile. 11 162 IPR003441 GO:0003677|GO:0006355
Pte10g00305 283 Gene3D NAC domain 20 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00305 Pte-Chr10 2546256 2547484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00305 7 270 NAC Transcription Factor Family AT1G69490 53.957 4.88e-96 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte10g00305 NAM 4.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00305 - - qsa:O6P43_025487 344.739