Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00303 ATGGGGAGATCACCTTGCTGTGAGAAGTTGGGTTTGAAAAAAGGACCATGGACCCCAGAAGAAGACCAAAAGCTCTTAGCTTACATTGAAAAGCATGGACATGGAAGCTGGCGTGCGTTGCCAGCCAAAGCTGGTATATATCAACTAGTTTGA 153 0.4575 MGRSPCCEKLGLKKGPWTPEEDQKLLAYIEKHGHGSWRALPAKAGIYQLV* 51
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00303 50 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 50 IPR017930 -
Pte10g00303 50 SUPERFAMILY Homeodomain-like 11 42 IPR009057 -
Pte10g00303 50 Pfam Myb-like DNA-binding domain 14 42 IPR001005 -
Pte10g00303 50 CDD SANT 16 45 IPR001005 -
Pte10g00303 50 ProSiteProfiles Myb-like domain profile. 9 40 IPR001005 -
Pte10g00303 50 Gene3D - 11 45 - -
Pte10g00303 50 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00303 Pte-Chr10 2522555 2522707 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00303 1 48 MYB Transcription Factor Family AT5G15310 85.417 7.58e-27 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte10g00303 Myb_DNA-binding 3.1e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00303 K09422 - mus:103992166 103.219