Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00290 ATGGCGAAGGTAATTGGAGGTGAAGCTGATGGATTATATTGGCGTGAGTGCCTGCTTAAAAAGCACGCAGAAAGTTCTCCGACCCATACAAAGACGTCAACTGGATTTTTTGCAGTTTATATAGGGGTGGAACGTCAGCGGTTTGTGGTGCCAATCAACTACTTGTCTCGCCCGCTGTTCAAGATATTGTTGGAGAAGACATACGATAAATTCGGGTTTCAGCAGAGCAACGGTCTGGTTGTTCCATGTACTGTGTCCACATTTCAGGAGGTAATGGACGGTGTAGAATGCAATCATGGCAACTTTGACTTGAGCAGTATTTTATACGAGCTTTAG 336 0.4464 MAKVIGGEADGLYWRECLLKKHAESSPTHTKTSTGFFAVYIGVERQRFVVPINYLSRPLFKILLEKTYDKFGFQQSNGLVVPCTVSTFQEVMDGVECNHGNFDLSSILYEL* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00290 111 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 91 IPR003676 GO:0009733
Pte10g00290 111 Pfam Auxin responsive protein 25 93 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00290 Pte-Chr10 2449071 2449406 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00290 35 106 Calmodulin-binding Proteins AT3G43120 45.833 4.20e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00290 K14488 - mnt:21402100 132.494