Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00287 ATGGATAAAGTTTTGATTTTACTGCTAATGGTTCTTTGTAATGGACTACGTTGGAATGCTACGGCAACAAATCACTCCACAAGACCAGAGTTTGTGAACCTTGGCGCCCTTTTCTCATTCAATACTACAGTGGGAAAAATTGTGAAAATTGCTCTGCAGACTGCAGTGGATGATGTAAATTCTGACACATCTATTCTCAATCAAACCAAGTTGAATTTATCTATGCAAGAGGATTCCAAATATAAAGGCTTTTTAAGCATTGCTGAGGCTTTGGAGCTCATGGAGAAAGATACTGTGGCTATAATTGGACCTCAAACTTCCATTACAGCTCATGTGATATCTCACATTGCAAACGAGCTCCAAGTTCCTCTTGTGTCATTTTCAGCATCAGACCCCACTCTTTCATCTCTTCAGTATCCATTTTTCGTCAGATTTGTCCACAGTGATATTTATCAGATGTCTGCAATTGCAGATATGGTTGAATACTACGGATGGAGAGAGGTCGTAGCAATCTATGTCGACGATGATCATGGGAGGGGAGGTATTTCTGCATTAGGGGATAAGCTTGCTGAGAAACGTTGTAAGATCTCATTTAAAGCTCCTATGAGTCCCTCTGCAAATCAGGTTGAAATTACTGATGTGCTTGTCAAAGTGGCCTTACAAGAGTCTAGGATTTTAGTCGTGCATACAAATACCTTTTATGGACCCCAGATTGTTAGGGTAGCAAGGAGTCTCGGGATGCTGGGAACTGGATATGTGTGGATAGCCACTTATTGGTTGTCAGCTGTTCTTGATACAGACAGTCCTCTCCCTGCAGATAATATGGAAGACATCCAAGGCATTCTTACACTGCGTGTATACACGCCTGAGTCTGAGCTTAAAAGAAAATTCATTTCTAGGTGGAGGAACTTGACAAGAGGAAAGGCTGCCGATGGCCCTCTTGGTTTAAGCACTTTCGGTCTATATGCCTATGACAGTGTGTGGTTCTTAGCTCGTGGTCTTGAGACATTTTTCAACCAAGGGAATGCTATCACTTTTTCAAATGATTCCAAGTTAGCTAATCTAGAGGGAGACAACTTGCATCTTGATACTTTAAAAATATTCAATGAAGGAAAGTTGTTTCTGAATAGTATTTTAGGAGTTAATATGACAGGCGTGGCAGGGCAAATAGAGTATACAGTCGATAGGAACCTTGTTCACCCAGCATATGAAATCATCAATGTGATAGGAACTGGGAGTAGGAGGATCGGTTATTGGTCTAATTACTCTGGTTTATCAGTTCAGCTGCCAGAAACGTTTTACTCAAAACCACCAAATCGATCCAGAGCTAATCAACAGCTACAAGATGTTATTTGGCCAGGACAAACAACTCAGAAACCTCGTGGCTGGGTTTTCCCAAACACTGGAAGGCTCTTGCAAATTGGAGTGCCCATTAGAATTAGTTTCCGTGATTTTGTCTCCCAAGTAGAAGGCACTGATAATTTTAAGGGATACTGCATTGATGTATTTATTGCAGCAGTACAATTGTTGCCATATGCTGTTCCATATAGATTTGTCCCTTTTGGGGATGGTCATAACAATCCTAGTCACACCGAGCTTGTGCGTCTCATCACAACTGGCACACTTGATGCTGCTGTAGGTGATATTACCATCACTACTAACAGAACAAAGATGGCTGATTTCACTCAGCCATTTATTGAATCTGGTCTCGTAGTGGTGGCGCCAGTTCATAAAGGACATTCAGATGTGTTTGCCTTCCTCAGACCATTTACCCCAATGATGTGGTGTGTCACTGCCATCTCTTTCTTAGTCGTGGGTGCAGTTGTGTGGGTTTTGGAGCACAGGTTGAATGATGAGTTCAGAGGCCCTCCCAGAAAACAAATTGTCACTATTTTATGGTTTAGTTTTTCAACCATGTTTTTCGCTCATAGGGAAAACACAGTTAGTACACTTGGTCGCTCAGTGCTGATCATTTGGTTATTTGTGGTTCTTATAATCAATTCAAGTTATACTGCAAGTTTGACCTCGATCCTAACCGTGCAAAAACTCTCCTCACCCATTAAAGGGATTGAAACTTTGAAGTATAGCAAAGATCCCATTGGCTACCAACAGGGCTCGTTTACTGCAAACTATTTGATTGCAGAATATGGTATTGAAGAATCCAGACTTGTTCCATTGAAGACAACCGAAGAAACTGCTAGAGCATTGCAAAATGGTCCTCAGAGGGGAGGAGTTGCAGCATATGTTGATGAACGTGCATATATGGAGCTTTTCCTTTCAAGCCATTGTGAGTTTAGCATTGTTGGCCAAGAGTTCACCAAAAGTGGATGGGGATTTGCCTTTCAACGTGACTCCCCATTAGCACTGGATCTGTCAACTGCCATTTTAAAACTATCGGAGACTGGGGATCTTCAAAGGATACATGACAAGTGGCTTTTCCGAAGTGCATGTACTTTACAAGGTGCAAAGCTGGAAGTGGATCGCCTTGAGCTCAAGAGCTTCGTTGGCCTCTATTCCCTATGTGGTCTAGCTTGTCTAATTGCTCTCCTCATATATTTGATACTCATGCTTCGCCAGTTCCGTAAACACGGCCCTGATGAAACTGATTCATCAACTGGACCAAGTGTTCGATCTCGGCGTCTGCAGACATTTCTTTCATTTGTTAACCAAAAGGAAGAAGAGGCAAAAGCTCAATCCAAGAGAAGGAAAATGGAGAGCATCTCAAACAAGAGTATCGTCGATGCAGATTCAGTAAACGGTTCTATTCATAGATTTCCTGATACGCCTTCAAACAAAAGCATACATGGTGCCAATGAAGTGTAA 2823 0.4191 MDKVLILLLMVLCNGLRWNATATNHSTRPEFVNLGALFSFNTTVGKIVKIALQTAVDDVNSDTSILNQTKLNLSMQEDSKYKGFLSIAEALELMEKDTVAIIGPQTSITAHVISHIANELQVPLVSFSASDPTLSSLQYPFFVRFVHSDIYQMSAIADMVEYYGWREVVAIYVDDDHGRGGISALGDKLAEKRCKISFKAPMSPSANQVEITDVLVKVALQESRILVVHTNTFYGPQIVRVARSLGMLGTGYVWIATYWLSAVLDTDSPLPADNMEDIQGILTLRVYTPESELKRKFISRWRNLTRGKAADGPLGLSTFGLYAYDSVWFLARGLETFFNQGNAITFSNDSKLANLEGDNLHLDTLKIFNEGKLFLNSILGVNMTGVAGQIEYTVDRNLVHPAYEIINVIGTGSRRIGYWSNYSGLSVQLPETFYSKPPNRSRANQQLQDVIWPGQTTQKPRGWVFPNTGRLLQIGVPIRISFRDFVSQVEGTDNFKGYCIDVFIAAVQLLPYAVPYRFVPFGDGHNNPSHTELVRLITTGTLDAAVGDITITTNRTKMADFTQPFIESGLVVVAPVHKGHSDVFAFLRPFTPMMWCVTAISFLVVGAVVWVLEHRLNDEFRGPPRKQIVTILWFSFSTMFFAHRENTVSTLGRSVLIIWLFVVLIINSSYTASLTSILTVQKLSSPIKGIETLKYSKDPIGYQQGSFTANYLIAEYGIEESRLVPLKTTEETARALQNGPQRGGVAAYVDERAYMELFLSSHCEFSIVGQEFTKSGWGFAFQRDSPLALDLSTAILKLSETGDLQRIHDKWLFRSACTLQGAKLEVDRLELKSFVGLYSLCGLACLIALLIYLILMLRQFRKHGPDETDSSTGPSVRSRRLQTFLSFVNQKEEEAKAQSKRRKMESISNKSIVDADSVNGSIHRFPDTPSNKSIHGANEV* 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00287 940 MobiDBLite consensus disorder prediction 923 940 - -
Pte10g00287 940 Gene3D - 759 819 - -
Pte10g00287 940 SUPERFAMILY Periplasmic binding protein-like I 28 464 IPR028082 -
Pte10g00287 940 FunFam Glutamate receptor 583 713 - -
Pte10g00287 940 PIRSF IGluLR_plant 1 935 IPR017103 -
Pte10g00287 940 PRINTS Metabotropic glutamate GPCR signature 133 152 IPR000337 GO:0004930|GO:0007186|GO:0016020
Pte10g00287 940 PRINTS Metabotropic glutamate GPCR signature 101 127 IPR000337 GO:0004930|GO:0007186|GO:0016020
Pte10g00287 940 PRINTS Metabotropic glutamate GPCR signature 168 185 IPR000337 GO:0004930|GO:0007186|GO:0016020
Pte10g00287 940 PRINTS Metabotropic glutamate GPCR signature 152 168 IPR000337 GO:0004930|GO:0007186|GO:0016020
Pte10g00287 940 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 891 IPR015683 -
Pte10g00287 940 Pfam Receptor family ligand binding region 49 410 IPR001828 -
Pte10g00287 940 Pfam Ligand-gated ion channel 813 844 IPR001320 GO:0015276|GO:0016020
Pte10g00287 940 CDD PBP1_GABAb_receptor_plant 33 429 IPR044440 -
Pte10g00287 940 FunFam Glutamate receptor 467 583 - -
Pte10g00287 940 CDD GluR_Plant 472 812 - -
Pte10g00287 940 Pfam Bacterial extracellular solute-binding proteins, family 3 492 812 IPR001638 -
Pte10g00287 940 Gene3D - 50 400 - -
Pte10g00287 940 Gene3D - 467 582 - -
Pte10g00287 940 SUPERFAMILY Periplasmic binding protein-like II 450 814 - -
Pte10g00287 940 Gene3D - 583 718 - -
Pte10g00287 940 Gene3D - 148 425 - -
Pte10g00287 940 FunFam Glutamate receptor 709 816 - -
Pte10g00287 940 SMART GluR_14 473 814 IPR001320 GO:0015276|GO:0016020
Pte10g00287 940 Coils Coil 890 910 - -
Pte10g00287 940 MobiDBLite consensus disorder prediction 919 940 - -
Pte10g00287 940 FunFam Glutamate receptor 148 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00287 Pte-Chr10 2419123 2424199 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00287 7 908 Ion Channels AT3G51480 59.624 0.0 1144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00287 K05387 - qsa:O6P43_033504 1302.35