Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00282 ATGCAAACTTGGGACATTGCCGAGTACAACAACGTAGGATATGGGGAACGGAATACCAAAGCAGAGACACAGATAGCAAATACCATCGAGTGGGAATATCAGAAGCTTTTATATGACCAACTCCAACAATCACAGCAGCAGTTTCAGAGTCAGGAGCAGCAAAAGGGACCTCGTACTGTCAAAACTGGAGACATGTGTGTGAAAGTAATGACTGATGAGCAAGTGGAAACTCTGAGAAAGCAAATAGCTATTTATGGCGTCGTCTGTGAGCAGTTGGAGCAGAAAGTAATGAAACTTGCACCGCAAGATCTCCAAGCGTTTAGGCTGGGGCAGCTATATGGTCATTCGATCATGTCATCAACTGCCTCAAGATTGATTTCCAGAAAACGGTGGCAACCCACTGCTGAGCAGGTTCAGATCCTTGAGGGCATATTTAATAAAGGAACGGCTACTCCAACCAGGGAAAATGTCAAAGAAATCACTGCTGAACTGAAATTGCATGGCGAAGTGAAGGAAACAAATGTCTACAACTGGTTTCAGAATAGGCGTGCAAGGTTGAAAAGAAAAGGGAAAACTCAACCTGACAACAAAAATGCTGAGCAGCCTCAAGTGGACACTACTGAAAATAAGTCAGCCATGCTCAACAAGAGAAAATCGCTGGATCTTCAGCCTCAGCCTCGCGATGAATCAGCTAAAAGGCATAACGCACATAGCTTCCAGTATTCCAATGGATCTTCTGATATGCATTTTCTGGGTTCTCATATGAACGAGGAAGATCTCATTGCCATGCTAGTATCACATGGTAGTCTAAATTCAACATTGAGTCACGCGCCAATGCCAGTTTGGGAAGGGATGTTCTCAAATTCAAAAGCTCCTGTAGGGTATAATGCGTATCAGCAACAAGGAGATCGACAACGAAACACTGATCATCGTTTTGGCAAAAGACTTCACAGCGAAAGACTAGCTCTGATGAGGACTGGCTTTACATAG 990 0.4394 MQTWDIAEYNNVGYGERNTKAETQIANTIEWEYQKLLYDQLQQSQQQFQSQEQQKGPRTVKTGDMCVKVMTDEQVETLRKQIAIYGVVCEQLEQKVMKLAPQDLQAFRLGQLYGHSIMSSTASRLISRKRWQPTAEQVQILEGIFNKGTATPTRENVKEITAELKLHGEVKETNVYNWFQNRRARLKRKGKTQPDNKNAEQPQVDTTENKSAMLNKRKSLDLQPQPRDESAKRHNAHSFQYSNGSSDMHFLGSHMNEEDLIAMLVSHGSLNSTLSHAPMPVWEGMFSNSKAPVGYNAYQQQGDRQRNTDHRFGKRLHSERLALMRTGFT* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00282 329 ProSiteProfiles 'Homeobox' domain profile. 124 189 IPR001356 GO:0003677
Pte10g00282 329 SMART HOX_1 126 193 IPR001356 GO:0003677
Pte10g00282 329 MobiDBLite consensus disorder prediction 196 210 - -
Pte10g00282 329 PANTHER WUSCHEL-RELATED HOMEOBOX 13 45 279 IPR044559 GO:0003700
Pte10g00282 329 MobiDBLite consensus disorder prediction 211 235 - -
Pte10g00282 329 Pfam Homeodomain 128 188 IPR001356 GO:0003677
Pte10g00282 329 MobiDBLite consensus disorder prediction 186 239 - -
Pte10g00282 329 CDD homeodomain 128 189 IPR001356 GO:0003677
Pte10g00282 329 SUPERFAMILY Homeodomain-like 123 193 IPR009057 -
Pte10g00282 329 Gene3D - 127 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00282 Pte-Chr10 2398419 2400305 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00282 65 189 Wox Gene Family AT4G35550 58.730 3.64e-45 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pte10g00282 Homeodomain 5.7e-16 CL0123