Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00281 ATGATTGAATGGGACAATCAGTGGGTGCAGCATCCACAACAACTTCAGCAGCATCAACTTCATCCGCAACAACAACAGGGAGAGGAGTTCCAGAATCGGACTGTTAATGGCGATGGAGGAGGAAGGGCTGCTGGAGGAGTAATGTATGTAAAGGTGATGACTGATGAGCAATTGGAAACTTTGAGGAGGCAAATCGCTGTATACGCAGAAATCTGTGAGCAGTTGATTGAAGCTCACAAGAACCTTACTGCTCAGCAAGATATTACAGGGGCAATGCTGGGAAACCTGTACTGTGACTCCTTCATGGCTGGTGGTCACAAGATAACTTCTAGACAGCGTTGGACTCCGACTCCAATGCAGCTTCAGATTCTTGAGCATGTATTTGACCAAGGGAATGGAACTCCAAGCAAGCAAAGGATCAAAGATATAACAGCTGAACTAAGTGAGCATGGGCAGATTTCTGAAACAAATGTTTATAATTGGTTTCAAAATAGGCGTGCTCGATCAAAAAGGAGACAGCAAAATCCAGCATCCAACAACCATACTACTGAATCAGAAGCAGAGGCTGAAGTTGACTTGGCTAAGGAGACAAAGACAAAGGCAGGGGATCTTCATTCTCAGCCCCAGCTTAATTCAGCCTCAAGCCCTGATTTACCATGCTTTCAGAATTCTGAAATATGCCATGCTGATATGCAGTATCTTGACCCTCAGTTGAGTAAGGTAGACACCTTGATTTCATCAGATGGTGTTCTAGAAGCTACAAGTCTGGACCAACTACCTATGTTTGATGGTATGCTCTCCAATTCAGGAAATGAGTACCTGACTGATGAGATGGAAGTTCCTGAAAACTACAATTTGTTCCAGCAGGCAGGAAACTAG 879 0.4425 MIEWDNQWVQHPQQLQQHQLHPQQQQGEEFQNRTVNGDGGGRAAGGVMYVKVMTDEQLETLRRQIAVYAEICEQLIEAHKNLTAQQDITGAMLGNLYCDSFMAGGHKITSRQRWTPTPMQLQILEHVFDQGNGTPSKQRIKDITAELSEHGQISETNVYNWFQNRRARSKRRQQNPASNNHTTESEAEAEVDLAKETKTKAGDLHSQPQLNSASSPDLPCFQNSEICHADMQYLDPQLSKVDTLISSDGVLEATSLDQLPMFDGMLSNSGNEYLTDEMEVPENYNLFQQAGN* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00281 292 MobiDBLite consensus disorder prediction 13 33 - -
Pte10g00281 292 Gene3D - 113 181 - -
Pte10g00281 292 SUPERFAMILY Homeodomain-like 110 174 IPR009057 -
Pte10g00281 292 MobiDBLite consensus disorder prediction 13 34 - -
Pte10g00281 292 Pfam Homeodomain 111 171 IPR001356 GO:0003677
Pte10g00281 292 PANTHER WUSCHEL-RELATED HOMEOBOX 13 29 286 IPR044559 GO:0003700
Pte10g00281 292 SMART HOX_1 109 176 IPR001356 GO:0003677
Pte10g00281 292 MobiDBLite consensus disorder prediction 166 190 - -
Pte10g00281 292 CDD homeodomain 111 173 IPR001356 GO:0003677
Pte10g00281 292 ProSiteProfiles 'Homeobox' domain profile. 107 172 IPR001356 GO:0003677
Pte10g00281 292 Coils Coil 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00281 Pte-Chr10 2394451 2396923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00281 1 287 Wox Gene Family AT4G35550 45.215 9.38e-72 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pte10g00281 Homeodomain 2.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00281 - - qsu:112005537 326.635