Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00280 ATGATTAATGCAAGAACACCAAAACTAGACGCCAAAGAAGCAGCACCAAACATTGTGGCAAGGTTGATGGGTATGGATACAATGACATTGCACATAAAATCTGTCGGTTGTTCAACTGAGAAATATATCAAAGATAATGAGAAGAAGCAGCAAAGAAATAAGACAGGATCTGTCGTTAGGGAGTCGTCTATTTCTTCGAGGCCTTTAAATCTTGACTGCACTTACAATTGTAAAAACAGAGATGTTGTTGGTGATGATGAATGGAACCGCTACCAAAATTCAGGAAAACAAAAGGACAGAGAACATCCTCAGGAGGAGGAACTCCGAAAGTTCAAGAAAGATTTTCAAGCATGGCAAGCTGCAAGATTTAAGGATTGTTCTGCTTTAGTTGACGATGGCAGCATATCTAAGCGATTGCTTGCTGAAGAGAGTCTCAACAACGCGAAGATGAAATTTTATTCGGATCCACAGGGAGTACCAAATGAGAAGGCTGCAGAACCTTGGAGTCATACTGGTTTACATGAAAGAGGTATCTCACAAAATCATGCTAATTCAATGGTCTTGTTCCCAGAAAAACAAAAGGATTTCTATCGTTCAAGGAGCAGCACCCGTGCTCAAGAATTTGAGCAGTCTTTACCGAAGAAATGTAATGAAAAGTTGCATGGATCTTCTTCTCCAAATAAGATAGTACTCCTAAAGGCAGGAAACGATAGGACCAGCGACCATAGGATCAATTCGTCGGGCACTTTGCAGGAGAGAAGCAATATGGAGAATTTTCTTGAGGCAGTGAGTGAGAGGCTCAAGTGTGAACTACAAGGGAAGACATCGAGAAACAGTTCTATGATTAGAGGAAGTGGAATAGAGACCCCTTACTGTGAAAAGGCAACCTGTCCTAAACAAATTGCTTATAACATAGCAAAACAGGTCCAAGAAGGCGTGACCAGAGATCTAAGGATGGGTTTGCTTTGTTCTGCACCAACAAGATCATACAAAAGTGGAATACAATTTAATAAACCACGTTCACCTGAATTTATAGACAGAGGTACCAGGAGATTCTTGTCTGAGAGACTAAGGAATGTGTTGAAGAGTGAAACTAAACTGAATGAGGAGGATGGTATCTCCAGATCAAATAGCCGGTCTAATCAAATGGTTAGACTAAAACAACCAAGGGGTACCTCAAAAGTAGCAAAAGGAATGAGATATTGGGAAATAATTGATAAACAAGAAATGCAAACCAGATGTTTCAGACAACCAAATGACAATGTCTTGGTCCTCCATGAATTGCCTTCCCGGAGAAAGCTTGAGGTCATTGGAGCTGCACCATCCCATGATGTCAAAAAACCAGAGAAAGACAGGTTTAATCTTAAAGAAAAAATTTCTAATTTTAAATACAGTTATATCTTTAGAAATAGACTGTTTGGAAGGAAGATGCAGGCAATAGACGAATCGCATAACAATGGATATGACCCCACAGCTATAGATTTTACAAATGTGCCAACAGTGCTTATGAGTATGGGCGAGACGCATGACAACTTTACTGAGGTGCCTCCCAGCCCTGCTTCTTTCTGTAGCAGTTCTCAGGAGGAACAGTGGAAGACTGTTGAATGCCTTCATCCTGCATCACCCCCTGACTTACCTTCAAGAAATGATAATTTAATGCCTGACTTTTGCGAAGAGATTGGCTCTGATATTAATGAGCTAATGCTACAACTAAATAAACTGGGTTCAGGGGGCACTGAGGAGACATTGAACAATCAAGAACCTAATGACTATGGACTGGTAAAGTTAGAGGACGAGGCAGAGGCTTACATAAGAGATATTCTTATTGCTTCTGGTCTATACTCTGAATCATGGGACAAAGCTCTCTTCAGAGGGGACACAATTTTGAAGCCAATTAGCAACTCTGTCTTCGAAGAACTAGAAGAATCTTTCAGAGCCAAAGAGAACACAAGTTCTAGAAAATATCACGATATGAACCGTAGAGTCTTATTTGATGTATTAAATGAAGCTCTTTCTGTAGTTCTTGGACAACCTCGTAAGATGCCACGGTTCATCAAAAAACTGATCAGTACCTCCATGCAGAGCATCCCATGTGGGAAGGAATTGCTGGGTATAGTATGGGAGATGGTGCGTCCGAACTTATATCCTCCATCTGACAAGTATTACTTTTCAATTGATAATATAGCAGCTCGAGATCTGGGATCATACCCTTGGTTTGGATCAACCAATGAAGAAACAGATTCTTTGGTAAGAGAGATAGAATGCTCGATAGTTAAAGACATGTTTGAAGAACTAGTGAACGACATCCATAAGGATATATCATCATGGAAATGTATAGAATATAGGGGCGGACTTGTCATCCAGCCTTTAGATTTATTTTCACATGTGAACAAGTGA 2397 0.4026 MINARTPKLDAKEAAPNIVARLMGMDTMTLHIKSVGCSTEKYIKDNEKKQQRNKTGSVVRESSISSRPLNLDCTYNCKNRDVVGDDEWNRYQNSGKQKDREHPQEEELRKFKKDFQAWQAARFKDCSALVDDGSISKRLLAEESLNNAKMKFYSDPQGVPNEKAAEPWSHTGLHERGISQNHANSMVLFPEKQKDFYRSRSSTRAQEFEQSLPKKCNEKLHGSSSPNKIVLLKAGNDRTSDHRINSSGTLQERSNMENFLEAVSERLKCELQGKTSRNSSMIRGSGIETPYCEKATCPKQIAYNIAKQVQEGVTRDLRMGLLCSAPTRSYKSGIQFNKPRSPEFIDRGTRRFLSERLRNVLKSETKLNEEDGISRSNSRSNQMVRLKQPRGTSKVAKGMRYWEIIDKQEMQTRCFRQPNDNVLVLHELPSRRKLEVIGAAPSHDVKKPEKDRFNLKEKISNFKYSYIFRNRLFGRKMQAIDESHNNGYDPTAIDFTNVPTVLMSMGETHDNFTEVPPSPASFCSSSQEEQWKTVECLHPASPPDLPSRNDNLMPDFCEEIGSDINELMLQLNKLGSGGTEETLNNQEPNDYGLVKLEDEAEAYIRDILIASGLYSESWDKALFRGDTILKPISNSVFEELEESFRAKENTSSRKYHDMNRRVLFDVLNEALSVVLGQPRKMPRFIKKLISTSMQSIPCGKELLGIVWEMVRPNLYPPSDKYYFSIDNIAARDLGSYPWFGSTNEETDSLVREIECSIVKDMFEELVNDIHKDISSWKCIEYRGGLVIQPLDLFSHVNK* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00280 798 MobiDBLite consensus disorder prediction 368 390 - -
Pte10g00280 798 MobiDBLite consensus disorder prediction 374 388 - -
Pte10g00280 798 Pfam Domain of unknown function (DUF4378) 602 764 IPR025486 -
Pte10g00280 798 MobiDBLite consensus disorder prediction 87 107 - -
Pte10g00280 798 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 431 770 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00280 Pte-Chr10 2390540 2393199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00280 12 773 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 30.884 1.72e-86 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00280 - - qsa:O6P43_033512 653.284