Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00278 ATGGATGAAGAAAATGTACTGAATTGCATTGATTTTGGCAATATTGATGCCGAAGACAGTCATGAAGCCCTTGTTCGCACTCCTGACAAAGATAGTGACGATAAGTTCAAAGTAGGAGCTGAATTCGATTCAATTGAGGGTTTTCAGATTCGACCAAGTAACTCACGCAAGAATGTTGTTCAGTTTGTCCGTTATAGGAAGGTATTACTAGGTCGCATAAGAAACGAGTTATTGGAGATGAAACAACGATCCCACAACCTCAGGCTTACACAATCGGTCTTGCAGTTACAGAAAATGCTTCTTTACGAAAATTACATAGACAAAACTCACTATGAGATTCTTAATATTAAGGAAGATGCGAGCTATGAAGAAATTCGAGTTAGCTACAGAACCGCTCTTCTCAATTCACACCCTGATAAAATGCTAAGAAGTTCTGAGACCTTCGACTGTGATCAAGAGCTTAGAGGTAGATTCTTGAAAGTGCAGAAGGCATGGGAAGTATTGAAAGATGCAAGCTCACGTGCAGTTTATGATTGCGAGCTTCAAGGGTCAAGAACGGATGCTGCACTTGCAGAAACTGCAGAAGACTTGTGCTTGGACGATATGATGGCTGCAGGTGTTGGAAAAGCCATTGAGCTGTTTCACCAGTGCAGATGTGGTGATCACTTCTGCATAGATTCGTTGGAATTAGGTAATATGGGATTTTTAGTATCGTTGGATGGAAACAAAATCTCTGTACAGGCTCCAGATGCACTACCAGTTGCAATTCTACTTCCTTGTGGATCTTGTTCACTCAAAGCTCGTCTATTAATCAACTGA 819 0.4103 MDEENVLNCIDFGNIDAEDSHEALVRTPDKDSDDKFKVGAEFDSIEGFQIRPSNSRKNVVQFVRYRKVLLGRIRNELLEMKQRSHNLRLTQSVLQLQKMLLYENYIDKTHYEILNIKEDASYEEIRVSYRTALLNSHPDKMLRSSETFDCDQELRGRFLKVQKAWEVLKDASSRAVYDCELQGSRTDAALAETAEDLCLDDMMAAGVGKAIELFHQCRCGDHFCIDSLELGNMGFLVSLDGNKISVQAPDALPVAILLPCGSCSLKARLLIN* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00278 272 Pfam DnaJ domain 109 178 IPR001623 -
Pte10g00278 272 PRINTS DnaJ domain signature 111 129 IPR001623 -
Pte10g00278 272 PRINTS DnaJ domain signature 153 173 IPR001623 -
Pte10g00278 272 PRINTS DnaJ domain signature 129 144 IPR001623 -
Pte10g00278 272 ProSiteProfiles dnaJ domain profile. 109 181 IPR001623 -
Pte10g00278 272 SUPERFAMILY Chaperone J-domain 70 177 IPR036869 -
Pte10g00278 272 PANTHER DPH3 HOMOLOG-RELATED 109 270 IPR044248 GO:0017183|GO:0046872
Pte10g00278 272 SMART dnaj_3 108 173 IPR001623 -
Pte10g00278 272 CDD DnaJ 109 170 IPR001623 -
Pte10g00278 272 Pfam CSL zinc finger 198 270 IPR007872 -
Pte10g00278 272 SUPERFAMILY CSL zinc finger 195 270 IPR036671 -
Pte10g00278 272 Gene3D DnaJ domain 95 185 IPR036869 -
Pte10g00278 272 Gene3D DPH Zinc finger 186 272 IPR036671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00278 Pte-Chr10 2365949 2368750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00278 110 179 C2H2 Transcription Factor Family AT1G74250 40.000 3.53e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00278 K17867 - cave:132184224 226.868