Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00258 ATGGAGGAGTCTGGTTCTAACAGGCGGGTTACCTTTCTTCATGGTGACCTGGACTTGAAAATCATAAAGGCAAGGAGACTGCCCAACATGGATATAGTTTCTGACCGTTTTCGCCGCTGCTTCACAGCATGTGGTGCTATCAAATACCCTTCATTGGGTCCGGCGAGGGAGGACGGAAATGCCGGCGATGGCGGTGGCGATATGGAAGTTCACCACCACCGGAAAATCATTACCAGTGATCCTTATGTTACCGTGTGTGTCCCTCAAGCTACTGTTGCTCGTACCCGTGTGATCAAGAATTCTCAGAACCCTTATTGGAACGAGCATTTCGATATCCCGTTGGCACACCCAGTATTTGATTTGGAGTTTCAGGTCAAAGATAATGATGTTTTTGGCTCGCAGGTCATTGGGACTGTGACAATTCCTGCCGAGAAGGTGGCCACCGGTCAAATCATAGGCGGTTGGTTTCCCATTCTTGGAGCCTCTGGTAAGCCACCAAAGCCTGAAACTGCACTGCAATTGGAACTGAAGTTCACCCCTATTGAAAAAAACTTGCTTTATAGGCAAAGCATTGCCTCTGATCCCGAGCATGGGGGTATCAGGGGTACTTATTTCCCGGTGAGGAGAGGAGGGCACGTGAGATTGTACCAAGATGCTCATGTTCGTGATGGGTTACTGCCCCAGATCGAATTAGATGATGGCAAGGTGTATAGGCACGAAAAGTGTTGGGAAGATATTTGTCATGCCATTTCTGAGGCTCACCATATGATATATATTACGGGATGGTCAGTGTTTCACAAGGTGAAGCTTGTTAGGGAGCCTACCAAGCCATTACCGAGAGGAGGGAATATGACTCTTGGCGATTTGCTCAGGTACAAGTCTCAAGAAGGAGTGCGAGTGTTACTACTGGTTTGGGATGACAAGACATCGCATGATAAGCTCTTAATCAAGTCGGAAGGAGTGATGATGACTCACGATGAAGAAACCAAGAAGTTTTTCAAACATTCCTCTGTTACATGTGTGTTGGCACCTCGCTATGCTAGCAGCAAGTTGAGCTACATTAAGCAGCAGGTTATTGGGACTGTCTTTACACATCATCAGAAATGTGTGCTTGTCGACACACAAGCACAGGGAAATAATCGAAAAATTACTGCATTTGTTGGAGGTATTGATCTATGCGATGGTCGCTATGACTCCCCTGACCATCGGCTTTTCCGTGATCTCAATACTGTATTCTCTGATGATTTTCACAATCCTACATTTGCTGCTGGAACAAAGGCACCTAGGCAACCATGGCATGACCTGCATAGCAGAATTGAAGGGCCTGCAGCGTATGATGTTTTACTAAATTTTGAGCAGCGATGGAAGAAAGCAACAAAATGGAGAGAGTTCAGTTTGTTTGTCAAAGGTGCTTCTCATTGGCATGATGATGCCTTACTGAAAATAGAGCGCATATCCTGGATAATAAGCCCTTCTCTTCCTGTGTCAAAGGATGGAAGTACAGCTGTTCCAGGCGATGATCCTATTGCATATGTTCTTCAAGAGGATGATCCTGAAAACTGGCACATTCAGATTTTCCGCTCAATTGACTCAGGATCGGTGAAAGGATTTCCGAAAAATGTTGATGCTGCCAAGGCCCAGAACCTTGTCTGTGCTAAGAACTTGGTAATAGATAAGAGCATTCAAGCAGCATATATTCAGGCGATTAGATCAGCTCAACATTTTATTTACATAGAGAACCAGTATTTTATTGGATCCTCATATGCATGGCCATCATACAAAAATGCAGGTGCTGATAATCTAATCCCTATGGAGTTGGCACTTAAAATTGCCAGTAAAATTAGAGCTAAGGAGCGATTTACAGTATATATCGTTATACCAATGTGGCCTGAGGGCGATCCGAATTCTGCATCGGTGCAAGAAATTCTCTTTTGGCAGAACCAGACAATGGAAACAATGTATCAAGTTGTGGCACGGGAACTGAAAGATATGCAATACGAAGGCTTGCATCCACGAGATTACCTAAATTTCTATTGCCTTGGTAACCGAGAAGAGCCTCCTGCTGAAGCTATGGACTCAAATGGTGCTAAGGTCTCAGATTCCCAAAAATTTGGTCGGTTTATGATTTATGTGCATGCCAAGGGAATGATCGTTGACGATGAATACATAATAGTTGGATCTGCAAATATTAATCAAAGATCTATGGCTGGTACAAAAGATACTGAGATAGCAATGGGTGGATATCAACCCCATTACACGTGGTCAACAAAACAGAAACATCCCCATGGTCAGATTTATGGTTATAGAATGTCTCTGTGGGCGGAACATCTAGGTTTAGGTGTGTTGGAAGAAAGCTTTGAGAAACCGGAGAGTTTGGATTGTGTGCGTAATGTGAATGCCATTGCAGAAGAAAATTGGGTAAAATTCACATCCGAGAATTTTTCTTCTTTGCAAGGACACCTTCTCAAGTATCCTGTAGAGGTAGATGCTGACGGGAAGGTAGGCCCTCTACCTGGATTCGAGAATTTCCCAGATGTCGGTGGTAAAGTAGTAGGAGCTTATTCTTCAACAATTCCAGATGTTTTAACAACATAA 2595 0.4397 MEESGSNRRVTFLHGDLDLKIIKARRLPNMDIVSDRFRRCFTACGAIKYPSLGPAREDGNAGDGGGDMEVHHHRKIITSDPYVTVCVPQATVARTRVIKNSQNPYWNEHFDIPLAHPVFDLEFQVKDNDVFGSQVIGTVTIPAEKVATGQIIGGWFPILGASGKPPKPETALQLELKFTPIEKNLLYRQSIASDPEHGGIRGTYFPVRRGGHVRLYQDAHVRDGLLPQIELDDGKVYRHEKCWEDICHAISEAHHMIYITGWSVFHKVKLVREPTKPLPRGGNMTLGDLLRYKSQEGVRVLLLVWDDKTSHDKLLIKSEGVMMTHDEETKKFFKHSSVTCVLAPRYASSKLSYIKQQVIGTVFTHHQKCVLVDTQAQGNNRKITAFVGGIDLCDGRYDSPDHRLFRDLNTVFSDDFHNPTFAAGTKAPRQPWHDLHSRIEGPAAYDVLLNFEQRWKKATKWREFSLFVKGASHWHDDALLKIERISWIISPSLPVSKDGSTAVPGDDPIAYVLQEDDPENWHIQIFRSIDSGSVKGFPKNVDAAKAQNLVCAKNLVIDKSIQAAYIQAIRSAQHFIYIENQYFIGSSYAWPSYKNAGADNLIPMELALKIASKIRAKERFTVYIVIPMWPEGDPNSASVQEILFWQNQTMETMYQVVARELKDMQYEGLHPRDYLNFYCLGNREEPPAEAMDSNGAKVSDSQKFGRFMIYVHAKGMIVDDEYIIVGSANINQRSMAGTKDTEIAMGGYQPHYTWSTKQKHPHGQIYGYRMSLWAEHLGLGVLEESFEKPESLDCVRNVNAIAEENWVKFTSENFSSLQGHLLKYPVEVDADGKVGPLPGFENFPDVGGKVVGAYSSTIPDVLTT* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00258 864 Gene3D C2 domain 13 190 IPR035892 -
Pte10g00258 864 Pfam Phospholipase D Active site motif 361 396 IPR001736 GO:0003824
Pte10g00258 864 ProSiteProfiles C2 domain profile. 1 156 IPR000008 -
Pte10g00258 864 FunFam Phospholipase D delta 233 477 - -
Pte10g00258 864 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 361 396 IPR001736 GO:0003824
Pte10g00258 864 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 181 IPR035892 -
Pte10g00258 864 Gene3D Endonuclease Chain A 230 475 - -
Pte10g00258 864 CDD C2_plant_PLD 13 179 - -
Pte10g00258 864 PANTHER PHOSPHOLIPASE D 7 853 IPR015679 -
Pte10g00258 864 PIRSF PLD_plant 1 864 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pte10g00258 864 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 707 734 IPR001736 GO:0003824
Pte10g00258 864 Pfam C2 domain 15 158 IPR000008 -
Pte10g00258 864 SMART pld_4 361 396 IPR001736 GO:0003824
Pte10g00258 864 SMART pld_4 707 734 IPR001736 GO:0003824
Pte10g00258 864 Pfam PLD-like domain 566 742 IPR025202 -
Pte10g00258 864 SMART C2_3c 16 155 IPR000008 -
Pte10g00258 864 SUPERFAMILY Phospholipase D/nuclease 204 470 - -
Pte10g00258 864 SUPERFAMILY Phospholipase D/nuclease 549 777 - -
Pte10g00258 864 Gene3D Endonuclease Chain A 529 759 - -
Pte10g00258 864 Pfam Phospholipase D C terminal 783 853 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00258 Pte-Chr10 2264493 2274881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00258 10 698 Phospholipase D Gene Family (Wang group) AT4G35790 70.767 0.0 1036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00258 K01115 - qsa:O6P43_024916 1406.35