Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00253 ATGGTTAGAAAGGACCTTATGGTGATGACTCCACCACCTACATTAGCAATGGAGCCTTCAGAAAATCCTTCTCCTTCTCAACCATCTACCTTGCAAACATCAAAACATTTGTGGGCAGGACTGGTTATTGGAATTTTAACAGTGATATTGATCGCTTTGTTATACTACCTTGTCAAGATGAAATTAATCAGCAGATGTCGAAAGCAAAGGTCCTCTTCTAATGAGAAAAAAAGGGAAAGCTTCAAAGAAGACATGACAATGTTAAGGCGATTCCAGTTTGAAGAATTAGAGAAAGCGACCAATAATTTTAGCTTAGATTGCTTGTTGGGTTCTGGTGCTTCTGGAAATGTTTACAAGGGGAAATTTGGTGTGGAAGGAACATTAGCTATCAAAAGGGCCCATGCCAATTCATTCATCAGCGTCGAAGATTTCAGAAACGAGGTGAGGCTGCTTTCAAAAGTGAAACACAGGAATCTTGTGGGTCTGGTTGGATATTGTGAAGAACATGCAGGTGAAAGGGGGAGAATGCTGGTCTATGAGTATGTTCCAAACGGTTCTCTTCTTGAATACATAATGGGTAACTTCTGGAGCTTAACTTGGCGACAAAGAGTACATGTGGCTATTGGAGCAGCCAAAGGTATAGCTTATTTGCACGAGGGAGTAAAGCCAAGCATAATCCATCGAGACTTGAAGCCTAGTAACATCTTAGTAGGAGATGGATATGAGGCCAAAGTTTCGGATTTTGGGCTGGTAAGGTCAGGGCCTATTGGAGATGATCAGTCCCATGTCAGTAGCCAGATCAAAGGGACCCCAGGATACCTTGACCCTGATTATTGCTCAAGCTTCCATTTGACCACATACAGTGATGTTTATAGCTTTGGGGTCATTCTTCTGCAACTCGTCGCTGCAAGGCCTGCAGTGGATACTGCCAGGAGTCCAAGAGATCATATAATCGATTGGGCACGGCCGAGCTTAGAGAAGGGTAATATTGAAGAGATAATAGACGCAAATCTTCTGTGCGAGCCATGCAATTTTGATTTGATGTTAAAGATGGGGCAGCTTGGCTTGAAATGTGTTGTTAAGGTCCCAAAACAACGTCCAACAATGACTCAAGTCTGGCAAGAGCTAGAAGAGGCCCTTCTCTTGGCTGAAAACTTCAACAAGCAACCATCGGGAGGTTTACGGAACAGTAAAAGTACATCACATCAATCAAGAAAAGCAGAACCTCGCAGATTCGTAGAATCACAAGAGTATTCAGATAACTTTGTAAGCATAGATGGCATTGGATTACAGAAGTTTCGTGTGGAGATGGATAGTTTTTCTTTTCAGAGCACAAGCTTAAGATGCTTAGAAAATAACAGTATCAGTATCGAACTAGACAATGACAATTGA 1392 0.421 MVRKDLMVMTPPPTLAMEPSENPSPSQPSTLQTSKHLWAGLVIGILTVILIALLYYLVKMKLISRCRKQRSSSNEKKRESFKEDMTMLRRFQFEELEKATNNFSLDCLLGSGASGNVYKGKFGVEGTLAIKRAHANSFISVEDFRNEVRLLSKVKHRNLVGLVGYCEEHAGERGRMLVYEYVPNGSLLEYIMGNFWSLTWRQRVHVAIGAAKGIAYLHEGVKPSIIHRDLKPSNILVGDGYEAKVSDFGLVRSGPIGDDQSHVSSQIKGTPGYLDPDYCSSFHLTTYSDVYSFGVILLQLVAARPAVDTARSPRDHIIDWARPSLEKGNIEEIIDANLLCEPCNFDLMLKMGQLGLKCVVKVPKQRPTMTQVWQELEEALLLAENFNKQPSGGLRNSKSTSHQSRKAEPRRFVESQEYSDNFVSIDGIGLQKFRVEMDSFSFQSTSLRCLENNSISIELDNDN* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00253 463 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Pte10g00253 463 SMART serkin_6 103 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00253 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Pte10g00253 463 SUPERFAMILY Protein kinase-like (PK-like) 81 376 IPR011009 -
Pte10g00253 463 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 30 414 - -
Pte10g00253 463 MobiDBLite consensus disorder prediction 388 412 - -
Pte10g00253 463 Gene3D Transferase(Phosphotransferase) domain 1 182 392 - -
Pte10g00253 463 ProSiteProfiles Protein kinase domain profile. 103 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00253 463 Pfam Protein tyrosine and serine/threonine kinase 106 376 IPR001245 GO:0004672|GO:0006468
Pte10g00253 463 Gene3D Phosphorylase Kinase; domain 1 61 181 - -
Pte10g00253 463 FunFam Putative LRR receptor-like serine/threonine-protein kinase 67 181 - -
Pte10g00253 463 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00253 Pte-Chr10 2221299 2223657 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00253 37 413 Receptor kinase-like Gene Family AT1G30570 36.430 8.00e-71 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pte10g00253 PK_Tyr_Ser-Thr 2.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00253 - - qsa:O6P43_033569 591.652