Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00244 ATGCAAATGAAGGCTCTCCCAGAAATCTCTGCAACACGTCCTTCGTATTTCTCATCAGTTTGCATGATCTTTATGTTCATCTTTCATCAATTTGAGACAAATGCACTATCGTTTTCCGGAAACGAAACATTTCCGGCTATTTACATTTTTGGGGACTCCATAGTTGACACCGGAAACAACAATTACATAAACACTTTAGTGAAGTGCAATTTCAAGCCATATGGGAAGGATTTTAATGGGGGACGACCATCAGGAAGATTTTCCAATGGGAAGGTTCCTTCTGACCTCTATGCTCAAGAATTCGGTATCAAGGAACTGGTGCCTCCTTATCTAGATCCGAATGTGGGGGTTGACGACTTCCTTACTGGTGTAAGCTTTGCTTCGGGTGCCGCAGGATATGATCCTATGACAAGCAACTCAGCAGCAGTCATATCTCTAAGTGATCAGTTAAGCATGTTCAGAAATGTGACGAAGCAACTGAAGGCAGCCATCGGTGAAAACAGAACAGCTCATACTGTGGCTTCAAGTTTATTCATATTGGTTGCATCAAGCAATGACATTTCAAATACTTTCTATTTAAGTCCATTCAGAAACATTCAGTATGATATAGACAATTATTCGGATTTCTTGCTCAACCATACTTCAGCATTTGTGCAGGAACTGTATAGTCTAGGAGCACGAAGAATTGCAATATCAAATGCACCACCATTGGGATGTATCCCTATTTTGAGGACAATATATGGAGGTCCAGAAAGAATGTGCGTAGAGTCAGTAAACCAGGCTTCCATGACTTTCAACAAGAAGCTCAAGAATCAAATGATGAATCTCCGGCAACGGTTTCCAGAAATAAAGCTTGCTGAACTTGATGCGTACACTCCGATACTTGATGTCATCCAAAACTTTGAACAATATGGATTTAAAATGGTGGATAGAGGATGCTGTGGCACAGGGTTTCTGGAGGTGAGCGTTCTTTGTAGTGAGTTTGAACCGACAACCTGTGCTAATGTTTCTGAATATGTCTTCTGGGATAGTTACCATCCAACAGAGAAATCATATAGGATACTAGTGTCCAAGAGTGTCGACAGCATCAAGCAGCAGTTTTTAGAGGGGAAAATTCATTGA 1122 0.41 MQMKALPEISATRPSYFSSVCMIFMFIFHQFETNALSFSGNETFPAIYIFGDSIVDTGNNNYINTLVKCNFKPYGKDFNGGRPSGRFSNGKVPSDLYAQEFGIKELVPPYLDPNVGVDDFLTGVSFASGAAGYDPMTSNSAAVISLSDQLSMFRNVTKQLKAAIGENRTAHTVASSLFILVASSNDISNTFYLSPFRNIQYDIDNYSDFLLNHTSAFVQELYSLGARRIAISNAPPLGCIPILRTIYGGPERMCVESVNQASMTFNKKLKNQMMNLRQRFPEIKLAELDAYTPILDVIQNFEQYGFKMVDRGCCGTGFLEVSVLCSEFEPTTCANVSEYVFWDSYHPTEKSYRILVSKSVDSIKQQFLEGKIH* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00244 373 Coils Coil 372 373 - -
Pte10g00244 373 Pfam GDSL-like Lipase/Acylhydrolase 47 356 IPR001087 GO:0016788
Pte10g00244 373 PANTHER GDSL ESTERASE/LIPASE EXL3 26 358 - -
Pte10g00244 373 CDD SGNH_plant_lipase_like 45 358 IPR035669 -
Pte10g00244 373 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 47 58 IPR008265 GO:0006629|GO:0016298
Pte10g00244 373 Gene3D SGNH hydrolase 33 367 IPR036514 -
Pte10g00244 373 FunFam GDSL esterase/lipase APG 37 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00244 Pte-Chr10 2143934 2145508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00244 41 365 Pollen Coat Proteome AT1G75910 36.667 8.96e-70 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00244 - - qsu:111991749 412.535