Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00227 ATGTCTTGTTACACCTCTTTCTATGATGTCCTCGGTATTCCCGTAGCAGCCACGAGCCAAGAGATCAAGGTGGCGTATCGACGGTTGGCAAGGCTATGCCACCCGGATGTGGTGGCTTTTGATCGGAAAGATTCCTCCGCTGACGATTTTATGAAGATTCATGCTGCCTATTCAACCCTTTTTGACCCTGGGAAGCGGGCAGATTATGACCAGACACTTTTCCGCCGTTATCAGCCCTCAACAGCGAAGACGGCGAAATTTTCCGGTTACACAGGTCGGAACTGGGAAACCGATCAGTGCTGGTAA 306 0.5065 MSCYTSFYDVLGIPVAATSQEIKVAYRRLARLCHPDVVAFDRKDSSADDFMKIHAAYSTLFDPGKRADYDQTLFRRYQPSTAKTAKFSGYTGRNWETDQCW* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00227 101 ProSitePatterns Nt-dnaJ domain signature. 50 69 IPR018253 -
Pte10g00227 101 ProSiteProfiles dnaJ domain profile. 6 73 IPR001623 -
Pte10g00227 101 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 5 83 - -
Pte10g00227 101 Pfam DnaJ domain 7 70 IPR001623 -
Pte10g00227 101 Gene3D DnaJ domain 2 91 IPR036869 -
Pte10g00227 101 SMART dnaj_3 5 65 IPR001623 -
Pte10g00227 101 SUPERFAMILY Chaperone J-domain 4 74 IPR036869 -
Pte10g00227 101 PRINTS DnaJ domain signature 8 26 IPR001623 -
Pte10g00227 101 PRINTS DnaJ domain signature 26 41 IPR001623 -
Pte10g00227 101 PRINTS DnaJ domain signature 45 65 IPR001623 -
Pte10g00227 101 PRINTS DnaJ domain signature 65 84 IPR001623 -
Pte10g00227 101 CDD DnaJ 7 62 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00227 Pte-Chr10 2036574 2039531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00227 8 70 C2H2 Transcription Factor Family AT1G74250 40.909 1.47e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00227 - - ccaj:109804908 154.836