Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00224 ATGGGTATCTGCCTGTCCTCCATTAAAATCACTTGCTTAAATACCAACAACACTAAAACCAGCAACGCGGAAACTAGCACCGGCGTTCAGAAAAGCAAAAGCAAACAACAAAGGAAGGCACAATCATCAACATCAAAGAACAAATTATCTATTCAAGTACGTAAGACGACCAATGTTTCCTATAAGACTCGGCAACAGACGCAACCAAGGAGTACTGCTCAAACTCGGATTAAAGACAGGCCGCCTACCTCAAGGCGAAAATCTGTGGCTTTCGCAAGTGGCAAGCGTACGGATTTCGGATATGATAAAGATTTTGTTAAACGTTACACGCTTGGAAAATTGTTGGGGCATGGACAATTTGGATTTACGTATGTTGCAACTGATAAAACAAATGGCGATCGAGTAGCAGTTAAGAGAATTGATAAAAACAAGATGCTTCTTCCTATTGCTGTTGAGGATGTGAAGCGAGAGGTCAAGATATTGCGAGAACTTACAGGGCACGAGAACGTAGTTCAGTTCTACAATGCATATGAGGATAATTCATATGTGTATATAGTAATGGAATTATGTGAGGGCGGGGAGCTGCTAGACCGGATATTGGCCAAGAAGGATGGCCATTATACAGAGAAGGATGCTGCAGTTGTCGTGAGGCAGATGCTCAAGGTTGCTGCACAGTGTCATTTACATGGTTTGGTGCACCGTGACATGAAACCTGAGAATTTTCTTTTCAAATCAGCCAAAGAAGATTCTTCGTTGAAAGCTACAGATTTCGGTTTGTCAGACTTCATAATGCCTGGGAAAAAATTTTCAGATATTGTTGGCAGCGCTTACTATGTTGCCCCTGAAGTATTGAAACGCAAGTCAGGGCCTCAATCAGATGTTTGGAGCATTGGTGTCATAACCTACATTTTGCTTTGTGGCAGACGTCCATTTTGGGACAAGACTGAAGATGGTATCTTCAGAGAGGTCTTAAGGAACAAGCCAAATTTTTGTCGAAATCCATGGCCCAATGTAAGCAACAGTGCTAAAGATTTTGTGAGGAAATTACTTGTAAAGGATCCTCAAGCAAGATTAACCGCTGCTCAGGCTCTATCTCACCCATGGGTTAGAGAAGGAGGAGATGCATTAGGTATACCCATAGATATATCTGTCCTGAATAACATGCGACAGTTTGTGAAGTACAGTCGTTTGAAACAGTTTGCACTAAGGGCATTGGCCAGCACTCTTGATGAAGAAGAGTTGGCTGATCTCAAAGATCAATTTGATGCAATAGATGTAGACAAAAATGGTTCTATTAGCTTGGAGGAAATGAGACAAGCCTTGGCCAAAGATCTCCCTTGGAAGTTGAAAGATTCACGTGTTCTAGAGATTTTGCAAGCGATAGACACAAACACAGACGGGCTAGTGGATTTCCAGGAGTTTGTTGCCGCTACGTTGCATGTGCATCAGTTGGAGGAACATGACTCTTTGAAGTGGCGCCAGCGTTCACAGGCTGCTTTTGATAAATTTGACATAGATAAAAATGGGTATATCACACAAGAAGAACTCAGAATGCACACAGGCATGCGAGGTTCCATTAGTCCACTACTTGAGGAAGCTGACATTGACAAAGATAGAACGATAAGGATATCGGAATTCCGTAGGCTTCTGCGAAATGCTAGCATGAATGCTAGAAGCCCAAAGTCAACCCGCGATGCACGGATATGA 1707 0.4265 MGICLSSIKITCLNTNNTKTSNAETSTGVQKSKSKQQRKAQSSTSKNKLSIQVRKTTNVSYKTRQQTQPRSTAQTRIKDRPPTSRRKSVAFASGKRTDFGYDKDFVKRYTLGKLLGHGQFGFTYVATDKTNGDRVAVKRIDKNKMLLPIAVEDVKREVKILRELTGHENVVQFYNAYEDNSYVYIVMELCEGGELLDRILAKKDGHYTEKDAAVVVRQMLKVAAQCHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIMPGKKFSDIVGSAYYVAPEVLKRKSGPQSDVWSIGVITYILLCGRRPFWDKTEDGIFREVLRNKPNFCRNPWPNVSNSAKDFVRKLLVKDPQARLTAAQALSHPWVREGGDALGIPIDISVLNNMRQFVKYSRLKQFALRALASTLDEEELADLKDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKDSRVLEILQAIDTNTDGLVDFQEFVAATLHVHQLEEHDSLKWRQRSQAAFDKFDIDKNGYITQEELRMHTGMRGSISPLLEEADIDKDRTIRISEFRRLLRNASMNARSPKSTRDARI* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00224 568 SUPERFAMILY Protein kinase-like (PK-like) 105 370 IPR011009 -
Pte10g00224 568 ProSiteProfiles EF-hand calcium-binding domain profile. 449 484 IPR002048 GO:0005509
Pte10g00224 568 Gene3D Transferase(Phosphotransferase) domain 1 195 377 - -
Pte10g00224 568 FunFam Calcium-dependent protein kinase 28 410 479 - -
Pte10g00224 568 ProSitePatterns EF-hand calcium-binding domain. 462 474 IPR018247 -
Pte10g00224 568 CDD STKc_CAMK 108 368 - -
Pte10g00224 568 FunFam calcium-dependent protein kinase 28-like 195 388 - -
Pte10g00224 568 ProSitePatterns EF-hand calcium-binding domain. 425 437 IPR018247 -
Pte10g00224 568 CDD EFh 416 477 IPR002048 GO:0005509
Pte10g00224 568 Pfam EF-hand domain pair 497 550 IPR002048 GO:0005509
Pte10g00224 568 Pfam EF-hand domain pair 416 478 IPR002048 GO:0005509
Pte10g00224 568 ProSiteProfiles Protein kinase domain profile. 109 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00224 568 SUPERFAMILY EF-hand 398 551 IPR011992 -
Pte10g00224 568 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Pte10g00224 568 ProSiteProfiles EF-hand calcium-binding domain profile. 491 526 IPR002048 GO:0005509
Pte10g00224 568 Pfam Protein kinase domain 109 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00224 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Pte10g00224 568 FunFam CDPK-related kinase 1 102 194 - -
Pte10g00224 568 Gene3D Phosphorylase Kinase; domain 1 102 194 - -
Pte10g00224 568 Gene3D - 395 549 - -
Pte10g00224 568 MobiDBLite consensus disorder prediction 17 78 - -
Pte10g00224 568 Gene3D - 385 479 - -
Pte10g00224 568 PANTHER SERINE/THREONINE-PROTEIN KINASE 87 543 - -
Pte10g00224 568 MobiDBLite consensus disorder prediction 17 91 - -
Pte10g00224 568 ProSiteProfiles EF-hand calcium-binding domain profile. 412 447 IPR002048 GO:0005509
Pte10g00224 568 ProSitePatterns EF-hand calcium-binding domain. 504 516 IPR018247 -
Pte10g00224 568 SMART efh_1 495 523 IPR002048 GO:0005509
Pte10g00224 568 SMART efh_1 525 553 IPR002048 GO:0005509
Pte10g00224 568 SMART efh_1 453 481 IPR002048 GO:0005509
Pte10g00224 568 SMART efh_1 416 444 IPR002048 GO:0005509
Pte10g00224 568 SMART serkin_6 109 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00224 Pte-Chr10 2013520 2018101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00224 1 560 EF-hand Containing Proteins AT2G17890 71.577 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte10g00224 Pkinase 6.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00224 K13412 - qsa:O6P43_033613 862.062