Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00218 ATGGAACACCAACCACAGTATCAACAGAGCCAACAGCAATCCACAAACGAGGAAGGCATCTGTGCCAGTGCAAAAGGTGGATACTTGTGCAGGCAGAGTAGTACACGGTGGACTCCCACAACGGACCAGATACGAATATTGAAGGACCTTTATTACAACAGTGGCGTTAGGTCCCCAAGTGCAGAGCAGATTCAGAGGATTTCTGCTAGACTGAGGCAGTACGGTAAAATTGAAGGCAAGAATGTCTTTTATTGGTTTCAGAACCACAAAGCTCGAGAAAGGCAGAAGAAAAGGTTCACTTCTGATGTCTCCATGCATAAGGGAGGAAATGTTTCTTGGAAACCTGATGCAACCATTAAGTATTCTCTCACATCTGCTGGGGCCTCTTCCGCATCTTGTTCTTCAGCTGGAATGGGCAATGTGGGACAGATAGGAACCAATGGATATGGATCGGCGACAATGGAGAAGAGCTTCAGGGACTGCTCTATATCTGCTGGAGATGGCAATGGAAACTTTGGCGGTGCCTTGAACCACAGCTGGGGTTTGGATGGTGTGGATCACTATGCAGCATACACCCTCATTGACAAAAGAAAACCAACTTATGAGCAAACAATAGAAGAGGATCAAGAAGAGGAAGCTGGTCCAGGGATTGAAACCCTTCCTCTGTTCCCTGTGCTGGGTGAGGACTTTCATGGTTATTGCCAACTCCAACCTGATTCTGTCTACTGCTGTGGCTATGGCTATGGCAGTGATGATGGAAACAACAGCGTTTCTCGCACGTCTCTCGATCTCAGCCTTAACTCCTACGGGCGCTGA 816 0.4767 MEHQPQYQQSQQQSTNEEGICASAKGGYLCRQSSTRWTPTTDQIRILKDLYYNSGVRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDVSMHKGGNVSWKPDATIKYSLTSAGASSASCSSAGMGNVGQIGTNGYGSATMEKSFRDCSISAGDGNGNFGGALNHSWGLDGVDHYAAYTLIDKRKPTYEQTIEEDQEEEAGPGIETLPLFPVLGEDFHGYCQLQPDSVYCCGYGYGSDDGNNSVSRTSLDLSLNSYGR* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00218 271 SMART HOX_1 32 100 IPR001356 GO:0003677
Pte10g00218 271 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 13 269 IPR044555 GO:0003700|GO:0099402
Pte10g00218 271 ProSiteProfiles 'Homeobox' domain profile. 30 96 IPR001356 GO:0003677
Pte10g00218 271 Pfam Homeodomain 34 95 IPR001356 GO:0003677
Pte10g00218 271 CDD homeodomain 35 97 IPR001356 GO:0003677
Pte10g00218 271 Gene3D - 30 95 - -
Pte10g00218 271 SUPERFAMILY Homeodomain-like 27 101 IPR009057 -
Pte10g00218 271 FunFam WUSCHEL-related homeobox 11 34 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00218 Pte-Chr10 1945848 1947240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00218 28 229 Wox Gene Family AT2G17950 40.486 1.91e-45 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pte10g00218 Homeodomain 1.2e-17 CL0123