Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00210 ATGGCACAAGAAGTTTTGTTCCCTCCTGTGTCAATCTTATTGGCTGTGATCTCTCGTATACCTCTTGTTCCTAGGGGCGGTACCCACCGCGTTGGTAAGGGTGCTTTTGGTAACAAGTGTCGTGGTGGTCGCATGTTAGCACCCACCAAGATTTGGCGACGATGGCACCGTAAGATCAATGTCAATCAAAAGAGATATGTTGTCGTCTCTGCCATTTCTACTTCGGCTATTCCTTCTCTCTTGATAGCACGTGGTCATCGCATCGAGAGTGTACCTGAAATGCCCCTGGTCATTAGTGATTCTGTTGAGATTGTTGAGAAGACTAGGGATGCCCTCAAGATATTGAAGATGGTGGGTGATTCTCCTGATGTTGACAAAGCTAAGGACAACCATTCCATCGGACTTGGTAAAGATAAGATGAGAAACAGGTGCTATATCTTCAGGAAAGGACCTCTCATTTTTTACGGTACTGGAGGGGCCAAGCTTGTGAAGGCCTTCAGGAACATTCTTGGTGTTCACATTGATAGACTCAATCTGCTGATGCTAGCTCCTGGCAGCCATCTTGGTAGATTTGTAATTTGGACCAAGACTGCTTTTGAGAAGTTGGATTCTGTTTATGGGACATTCGATAAACCATCTGAGAAGAAGGGCTATATGCTTCCTAAGGTCAAAATGGTGAACGCTGACCTGTCTAGGGTCATCAATTCTGATGAGGTCCAATCTGTTGTGAAACCAATAAAGAATGAGGTTAGGAGAGCACCATTGAAGAAGAACCCACTGAAGGACCAATAA 792 0.4495 MAQEVLFPPVSILLAVISRIPLVPRGGTHRVGKGAFGNKCRGGRMLAPTKIWRRWHRKINVNQKRYVVVSAISTSAIPSLLIARGHRIESVPEMPLVISDSVEIVEKTRDALKILKMVGDSPDVDKAKDNHSIGLGKDKMRNRCYIFRKGPLIFYGTGGAKLVKAFRNILGVHIDRLNLLMLAPGSHLGRFVIWTKTAFEKLDSVYGTFDKPSEKKGYMLPKVKMVNADLSRVINSDEVQSVVKPIKNEVRRAPLKKNPLKDQ* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00210 263 Pfam 60S ribosomal protein L4 C-terminal domain 216 262 IPR025755 -
Pte10g00210 263 PANTHER 60S RIBOSOMAL PROTEIN L4 17 262 IPR045240 -
Pte10g00210 263 Gene3D - 15 244 IPR023574 GO:0003735|GO:0005840|GO:0006412
Pte10g00210 263 SUPERFAMILY Ribosomal protein L4 18 204 IPR023574 GO:0003735|GO:0005840|GO:0006412
Pte10g00210 263 Pfam Ribosomal protein L4/L1 family 37 203 IPR002136 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00210 Pte-Chr10 1902719 1904270 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00210 16 262 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 68.127 5.01e-127 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00210 K02930 - jre:108999330 387.497