Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00208 ATGACTGAGCCATGCGTCCCACCTGGATTTCGGTTCCACCCAACCGATGAAGAGCTCGTTGGATATTACCTGAGAAAGAAAGTCGGTTCTCAGAAAATTGATCTCGATGTCATCAGAGATATCGATCTATATCGTATAGAACCATGGGATCTCATAGCAGAGAGATGCCGGATTGGTTATGAGGAGCAGAACGAGTGGTATTTCTTCAGCCACAAGGATAAGAAGTATCCGACTGGGACAAGGACTAATAGAGCAACCATGGCTGGGTTCTGGAAGGCCACTGGAAGAGACAAGGCAGTATATGATAAAGCAAAACTGATTGGGATGAGGAAAACCCTCGTTTTCTACAAAGGAAGAGCCCCAAATGGACAGAAAACTGACTGGATTATGCACGAGTACAGACTCGAATCTGATGAGAATGGACCTCCACAGGCATGCAACTCTACATGTGAAGAAGGATGGGTTGTCTGCAGAGCATTCAAGAAAAGAACCACTGGACAAACAAGGGCCATTGAAGGATGGGATTCAAGCTACTTCTACGATGAAGCAAGTGGGGTTAGCTCAGTGGTCGATCCATTTGATCTCATTTCAAGGCAACCTCAGAATCTTGTAGCTCAAAGTTTTATGTGTAAGCAAGAGATAGAATCAGATCATTCGAGTTTCATGCATTCAGATAATTTTGTACAGTTGCCTCGGCTAGTGAGCCCATCTTTGCCATTGATTAAGAGGCCAGGCTTAATGCCTTTGATACCAGAGAATAACCAAGATGATGATCGAAATAGAGTAACCAATGTAGGAAGCGAAAGAGTAACTGACTGGAGGGCTCTTGACAAGTTTGTTGCTTCACAGTTGAGTCCTGAAGACCGGAACGGAATGTCAAGCCTCGAAACGCACGACACTTCAGACATGGCGTTATTACTATTACTAAGTAGCAGGGATGAAGAGAACAAGTTAAGCTCATTCTTGAGTTCCAATTCAGACGGTGATATCGGAATATGCGTATTTGATAAATGA 1014 0.4389 MTEPCVPPGFRFHPTDEELVGYYLRKKVGSQKIDLDVIRDIDLYRIEPWDLIAERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKAKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDENGPPQACNSTCEEGWVVCRAFKKRTTGQTRAIEGWDSSYFYDEASGVSSVVDPFDLISRQPQNLVAQSFMCKQEIESDHSSFMHSDNFVQLPRLVSPSLPLIKRPGLMPLIPENNQDDDRNRVTNVGSERVTDWRALDKFVASQLSPEDRNGMSSLETHDTSDMALLLLLSSRDEENKLSSFLSSNSDGDIGICVFDK* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00208 337 Pfam No apical meristem (NAM) protein 7 135 IPR003441 GO:0003677|GO:0006355
Pte10g00208 337 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 234 - -
Pte10g00208 337 SUPERFAMILY NAC domain 3 162 IPR036093 GO:0003677|GO:0006355
Pte10g00208 337 FunFam NAC domain-containing protein 15 166 - -
Pte10g00208 337 Gene3D NAC domain 15 166 IPR036093 GO:0003677|GO:0006355
Pte10g00208 337 ProSiteProfiles NAC domain profile. 6 162 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00208 Pte-Chr10 1857270 1861774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00208 3 338 NAC Transcription Factor Family AT2G18060 63.342 2.49e-159 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte10g00208 NAM 1.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00208 - - aprc:113869508 546.969