Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00189 ATGGCTGGTTTTTTCTCATTAGGCGGAGGAAGCAACAGAGCCAATAACAACAGCAACCAAGAGGACGAAGAACAGCGCCGAAGCACTACAGAGATTCCTCATCCAGACAGTTTAGTTTGGTTCAGAAACGAAGATGTTCCGTACAACAGGGGTTTCGAGCTATGGCAGCACCAGCAGCAGCAGCAACTCCTTCAACAACAGAGACAATACCTCCACCAACAAGACCTTTACTCGTCAGCTGCTGCCTTAGGCGTGGGGCCTAGTGGGAGCTCAATCAACATAGCCATGTCGGATGACCATTCATCGTCGAGATCAGCCTTCATGATGATTGGGTCTTCAAGTGGTAGCGGAAGAAGTGGAGGAGGAGGAATAAGCTGCCAGGACTGTGGAAACCAAGCCAAGAAGGACTGCATTCACATGCGGTGTAGGACATGCTGTAAGAGCCGAGGCTTCAACTGCTCGACCCATGTCAAAAGCACTTGGGTTCCAATTGCAAAGCGTCGTGAACGGCAACAACAGCTAGCTTCTTTGCAACAAGAAGATCAACCCCAACTCCAGCAGCAACTTCAGCTTCGTGGAGAGAACTACAAAAGAGAGAGAGCCAACACTAGCAATAATAACCCAAACCCTCCATCTCTCGCCTGCACTCGCTTGCCCAACATCTCATCAGGAGAAAGCTCTTCCGGTGGTGGGACAATTGGTGGAGGAGTTCAACCCTTGAACCTCATACCTAGTGCTGGTGATCCCGCCAGCACTTCAACCTTGGGCACTAGTGCAAGTGGTGATGGTGGTGGAGCTGCGGCAGCATCTTCTGCTGGGGTACTCGTGGATCCTTCTCTCTATCCATCTCCGCTCAACTCTTTCATGGCTGGTACGCAATTCTTCCCACATCCAAGATCTTGA 903 0.5083 MAGFFSLGGGSNRANNNSNQEDEEQRRSTTEIPHPDSLVWFRNEDVPYNRGFELWQHQQQQQLLQQQRQYLHQQDLYSSAAALGVGPSGSSINIAMSDDHSSSRSAFMMIGSSSGSGRSGGGGISCQDCGNQAKKDCIHMRCRTCCKSRGFNCSTHVKSTWVPIAKRRERQQQLASLQQEDQPQLQQQLQLRGENYKRERANTSNNNPNPPSLACTRLPNISSGESSSGGGTIGGGVQPLNLIPSAGDPASTSTLGTSASGDGGGAAAASSAGVLVDPSLYPSPLNSFMAGTQFFPHPRS* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00189 300 MobiDBLite consensus disorder prediction 1 36 - -
Pte10g00189 300 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 216 IPR007818 GO:0003700|GO:0006355
Pte10g00189 300 NCBIfam putative zinc finger domain, LRP1 type 125 167 IPR006510 -
Pte10g00189 300 MobiDBLite consensus disorder prediction 245 260 - -
Pte10g00189 300 MobiDBLite consensus disorder prediction 200 234 - -
Pte10g00189 300 MobiDBLite consensus disorder prediction 200 271 - -
Pte10g00189 300 Pfam Domain of unknown function (DUF702) 123 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00189 Pte-Chr10 1686310 1688463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00189 1 301 C2H2 Transcription Factor Family AT3G51060 40.000 4.88e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Pte10g00189 DUF702 1.9e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00189 - - cpap:110822173 229.18