Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00185 ATGTTTTCATTGAAAGAAATGGGGTGGATGGGGTTGTCCCCTACAGCATCCACGTTGTTTTCTGCTTATACCTCCTTCATTGCTATGCTGATGTTTGTCCGCTCAATGGTCAACGAGCTCTCACGTCTTGTCCCTGATTCACTTCGCACATACCTCTCCTCTTTTCTTGAGAACCACTTCCGATCTCGTACCAACCATCTCACACTTCTCATTGATGAGAGTGATGGAATGACCCCCAACCAGGTGTACCAAGCTGCCGAGGTTTATCTCCGTACAAAGGTCAACCTCACGACCACGCAACGCCTACGTGTCTACAAAGCCGAGCGCCAAGAGTTGCTCAATCTCACTTTCGACAACAAGGAGGAAATCGCTGATTCCTTCGAGGACGACAAAGTTGAGCTCAAATGGCGTTTTCTCTACACTGAACCAAAGAAAAATTCCGACACAGATGGAAAACATCATTTTGAGCTCACTTTCCACAAGAGATTAAAAGACATGGTTTTGAGTTCTTATCTCCCACATGTTATGGTAAAGGCTAAAGAAATCCAAGAGAAAGAGAAAGCAGTCATGCTCTACCATAGGGGCAGGTCTTATCATCTGAATCACCCATCCACATTTGACACCCTTGCCTTGGACCCTCAGCTTAAGAAGTTCGTCATCGATGATTTGCATCGGTTTCTGAGAAGGAGAGAATTTTATAAGAAAGTTGGCAAGACATGGAAAAGAGGGTATTTATTGTATGGTCCACCTGGTACTGGGAAGTCGAGCATGATAGCAGCCATGGCTAATTACCTCAATTTCAATATCTATGATTTGGAGCTTACCAGTTTATCCTCCGATTTCAATCTCAGGAAAACAATGTCAAGAACCTCCAGTCGGTCGATAGTGGTGATTGAGGATATAGATTGCGTTGTACCGACGCATAAACGACAAAGTCCTCGTCAATCTGATGCATCACTCGACACCACCAAGTTGACACTGTCGGGTCTTCTGAATTTTATTGATGGTTTATGGTCAAGCTTTGGGGATGGGAGAATCATAGTGTTCACCACCAACCATAAGGATAGGCTTGACCCTGCGTTGTTGCGACCTGGCAGAATGGATGTGCACATCAACATGTCCTACTGCACAGTTGAAGCCTTCAAGTTCTTAATATCCAACTATTTGGGACTTGCAGAGCATGGTAAGAGTCGTTTCTATGAGGAAGCTGGAAGGCTAATAGAGAAAACACAGGTGACCCCTGCTGAGGTTGCAGAGGAATTATTGAAGAGTGAAGATACTGAAGCTGCACTTGAAGGACTTGTCAACTTCCTTAGACATAAGACAGTTGAACAAGAAGCTAAGAATGAAAGCAAAGGGACTGTCCCAGATAAGGATGAAAATGATGGGAGTAATGCAGACATCGGAAAAGGTCCAAGGGAATGA 1425 0.4442 MFSLKEMGWMGLSPTASTLFSAYTSFIAMLMFVRSMVNELSRLVPDSLRTYLSSFLENHFRSRTNHLTLLIDESDGMTPNQVYQAAEVYLRTKVNLTTTQRLRVYKAERQELLNLTFDNKEEIADSFEDDKVELKWRFLYTEPKKNSDTDGKHHFELTFHKRLKDMVLSSYLPHVMVKAKEIQEKEKAVMLYHRGRSYHLNHPSTFDTLALDPQLKKFVIDDLHRFLRRREFYKKVGKTWKRGYLLYGPPGTGKSSMIAAMANYLNFNIYDLELTSLSSDFNLRKTMSRTSSRSIVVIEDIDCVVPTHKRQSPRQSDASLDTTKLTLSGLLNFIDGLWSSFGDGRIIVFTTNHKDRLDPALLRPGRMDVHINMSYCTVEAFKFLISNYLGLAEHGKSRFYEEAGRLIEKTQVTPAEVAEELLKSEDTEAALEGLVNFLRHKTVEQEAKNESKGTVPDKDENDGSNADIGKGPRE* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00185 474 Gene3D - 196 371 IPR027417 -
Pte10g00185 474 Pfam Domain associated at C-terminal with AAA 44 138 IPR025753 -
Pte10g00185 474 PANTHER BCS1 AAA-TYPE ATPASE 21 445 - -
Pte10g00185 474 MobiDBLite consensus disorder prediction 442 474 - -
Pte10g00185 474 Gene3D - 372 445 - -
Pte10g00185 474 SMART AAA_5 240 377 IPR003593 GO:0016887
Pte10g00185 474 CDD RecA-like_BCS1 219 373 - -
Pte10g00185 474 ProSitePatterns AAA-protein family signature. 345 363 IPR003960 GO:0005524|GO:0016887
Pte10g00185 474 Pfam ATPase family associated with various cellular activities (AAA) 245 374 IPR003959 GO:0005524|GO:0016887
Pte10g00185 474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 422 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00185 Pte-Chr10 1660233 1662596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00185 144 373 Calmodulin-binding Proteins AT3G56690 24.583 4.14e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00185 - - qsa:O6P43_024803 505.753